Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.67□□□□□ -1.5
EPHB3P54753 RPL7P6-201ENST00000480903 738 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 LARP1BP2-201ENST00000486594 519 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.67□□□□□ -1.5
EPHB3P54753 AC108078.1-201ENST00000508073 725 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 IMPA1P1-201ENST00000510718 842 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.67□□□□□ -1.5
EPHB3P54753 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
EPHB3P54753 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.67□□□□□ -1.5
EPHB3P54753 AC083923.1-201ENST00000523708 376 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC5.67□□□□□ -1.5
EPHB3P54753 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.67□□□□□ -1.5
EPHB3P54753 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.67□□□□□ -1.5
EPHB3P54753 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.67□□□□□ -1.5
EPHB3P54753 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.67□□□□□ -1.5
EPHB3P54753 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.67□□□□□ -1.5
EPHB3P54753 AC087763.1-201ENST00000603391 286 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.67□□□□□ -1.5
EPHB3P54753 AC005084.1-201ENST00000605160 304 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 MIR1302-2-201ENST00000607096 138 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.67□□□□□ -1.5
EPHB3P54753 AC135507.2-201ENST00000612443 309 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 STMN1P1-201ENST00000617809 440 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.67□□□□□ -1.5
EPHB3P54753 MIR6863-201ENST00000636112 90 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
EPHB3P54753 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
EPHB3P54753 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
EPHB3P54753 PROS2P-201ENST00000474651 1951 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
EPHB3P54753 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
EPHB3P54753 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
EPHB3P54753 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
EPHB3P54753 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
EPHB3P54753 SPATA2P1-201ENST00000431223 2055 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
EPHB3P54753 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
EPHB3P54753 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
EPHB3P54753 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
EPHB3P54753 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
EPHB3P54753 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
EPHB3P54753 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
EPHB3P54753 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
EPHB3P54753 AL359955.1-201ENST00000455242 3275 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
EPHB3P54753 HMGB1P5-201ENST00000255320 642 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 OR4K15-201ENST00000305051 1216 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 RNU6-1227P-201ENST00000383981 107 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 Y_RNA.548-201ENST00000384656 105 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 AL590004.1-201ENST00000405321 300 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 OR4K12P-201ENST00000406538 961 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 FAT1P1-201ENST00000406588 507 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 SDCBPP3-201ENST00000419629 891 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 AC006065.1-201ENST00000422539 802 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.66□□□□□ -1.5
EPHB3P54753 AC092651.1-201ENST00000426110 312 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.66□□□□□ -1.5
EPHB3P54753 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.66□□□□□ -1.5
EPHB3P54753 RPL39P6-201ENST00000448289 150 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
EPHB3P54753 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC5.66□□□□□ -1.5
EPHB3P54753 CALM1P2-201ENST00000452941 448 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.66□□□□□ -1.5
EPHB3P54753 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.66□□□□□ -1.5
EPHB3P54753 AC091544.1-201ENST00000484702 348 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 AC231760.1-201ENST00000498002 260 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
EPHB3P54753 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.66□□□□□ -1.5
EPHB3P54753 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.66□□□□□ -1.5
EPHB3P54753 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.66□□□□□ -1.5
EPHB3P54753 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.66□□□□□ -1.5
EPHB3P54753 AC114786.4-201ENST00000508771 728 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.66□□□□□ -1.5
EPHB3P54753 RN7SKP31-201ENST00000516354 278 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
EPHB3P54753 AC087276.1-201ENST00000529659 480 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.66□□□□□ -1.5
EPHB3P54753 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.66□□□□□ -1.5
EPHB3P54753 AL133457.1-201ENST00000564251 987 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 RN7SL708P-201ENST00000580952 299 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 MIR4637-201ENST00000582405 84 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 AL390838.2-201ENST00000602394 274 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
EPHB3P54753 MEMO1P5-201ENST00000604810 406 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 AL009028.1-201ENST00000604895 802 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 BNIP3P4-201ENST00000604946 565 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 Y_RNA.812-201ENST00000610788 101 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
EPHB3P54753 Y_RNA.784-201ENST00000613803 101 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 Y_RNA.787-201ENST00000616522 101 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 Y_RNA.780-201ENST00000617336 101 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 Y_RNA.801-201ENST00000619005 101 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 AC090527.3-201ENST00000619041 548 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 AC007342.8-201ENST00000623278 678 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 AC120349.2-201ENST00000625002 298 ntBASIC5.66□□□□□ -1.5
EPHB3P54753 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
EPHB3P54753 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
EPHB3P54753 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
EPHB3P54753 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms