Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CLCNKAP51800 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CLCNKAP51800 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.49□□□□□ -1.69
CLCNKAP51800 MTND4P10-201ENST00000446199 1363 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CLCNKAP51800 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLCNKAP51800 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLCNKAP51800 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLCNKAP51800 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.48□□□□□ -1.69
CLCNKAP51800 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.48□□□□□ -1.69
CLCNKAP51800 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLCNKAP51800 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.48□□□□□ -1.69
CLCNKAP51800 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLCNKAP51800 RNF6P1-201ENST00000444889 1784 ntBASIC4.48□□□□□ -1.69
CLCNKAP51800 AL355852.1-201ENST00000454081 1771 ntBASIC4.48□□□□□ -1.69
CLCNKAP51800 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CLCNKAP51800 RNU1-94P-201ENST00000362627 173 ntBASIC4.48□□□□□ -1.69
CLCNKAP51800 RNU1-83P-201ENST00000363426 164 ntBASIC4.48□□□□□ -1.69
CLCNKAP51800 RPL31P52-201ENST00000407532 367 ntBASIC4.48□□□□□ -1.69
CLCNKAP51800 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.48□□□□□ -1.69
CLCNKAP51800 RPL22P18-201ENST00000417197 377 ntBASIC4.48□□□□□ -1.69
CLCNKAP51800 AC027644.1-201ENST00000419595 298 ntBASIC4.48□□□□□ -1.69
CLCNKAP51800 MTCO2P21-201ENST00000419780 677 ntBASIC4.48□□□□□ -1.69
CLCNKAP51800 AL513175.2-201ENST00000422071 443 ntBASIC4.48□□□□□ -1.69
CLCNKAP51800 RPEP3-201ENST00000425462 676 ntBASIC4.48□□□□□ -1.69
CLCNKAP51800 RPS12P10-201ENST00000427031 377 ntBASIC4.48□□□□□ -1.69
CLCNKAP51800 RAC1P8-201ENST00000427086 527 ntBASIC4.48□□□□□ -1.69
CLCNKAP51800 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLCNKAP51800 NANOGP2-201ENST00000435391 727 ntBASIC4.48□□□□□ -1.69
CLCNKAP51800 AL935212.3-201ENST00000450729 284 ntBASIC4.48□□□□□ -1.69
CLCNKAP51800 HMGB3P21-201ENST00000452483 547 ntBASIC4.48□□□□□ -1.69
CLCNKAP51800 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLCNKAP51800 TRBV8-2-201ENST00000475637 270 ntBASIC4.48□□□□□ -1.69
CLCNKAP51800 RPL23AP37-201ENST00000479658 549 ntBASIC4.48□□□□□ -1.69
CLCNKAP51800 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.48□□□□□ -1.69
CLCNKAP51800 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLCNKAP51800 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.48□□□□□ -1.69
CLCNKAP51800 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.48□□□□□ -1.69
CLCNKAP51800 NDUFB4P12-201ENST00000513465 390 ntBASIC4.48□□□□□ -1.69
CLCNKAP51800 RAB9BP1-201ENST00000519581 626 ntBASIC4.48□□□□□ -1.69
CLCNKAP51800 C1GALT1P3-201ENST00000522049 819 ntBASIC4.48□□□□□ -1.69
CLCNKAP51800 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.48□□□□□ -1.69
CLCNKAP51800 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CLCNKAP51800 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.48□□□□□ -1.69
CLCNKAP51800 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.48□□□□□ -1.69
CLCNKAP51800 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.48□□□□□ -1.69
CLCNKAP51800 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.48□□□□□ -1.69
CLCNKAP51800 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.48□□□□□ -1.69
CLCNKAP51800 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.48□□□□□ -1.69
CLCNKAP51800 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.48□□□□□ -1.69
CLCNKAP51800 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.48□□□□□ -1.69
CLCNKAP51800 MIR4284-201ENST00000578924 81 ntBASIC4.48□□□□□ -1.69
CLCNKAP51800 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.48□□□□□ -1.69
CLCNKAP51800 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.48□□□□□ -1.69
CLCNKAP51800 BNIP3P4-201ENST00000604946 565 ntBASIC4.48□□□□□ -1.69
CLCNKAP51800 AC107952.2-201ENST00000606048 486 ntBASIC4.48□□□□□ -1.69
CLCNKAP51800 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
CLCNKAP51800 VN1R74P-201ENST00000613259 503 ntBASIC4.48□□□□□ -1.69
CLCNKAP51800 VN1R7P-201ENST00000619242 903 ntBASIC4.48□□□□□ -1.69
CLCNKAP51800 AC048344.4-201ENST00000619744 527 ntBASIC4.48□□□□□ -1.69
CLCNKAP51800 AP006248.2-201ENST00000623309 592 ntBASIC4.48□□□□□ -1.69
CLCNKAP51800 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CLCNKAP51800 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
CLCNKAP51800 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLCNKAP51800 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLCNKAP51800 LINC01355-201ENST00000566551 5444 ntBASIC4.48□□□□□ -1.69
CLCNKAP51800 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CLCNKAP51800 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLCNKAP51800 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CLCNKAP51800 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CLCNKAP51800 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLCNKAP51800 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CLCNKAP51800 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLCNKAP51800 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLCNKAP51800 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CLCNKAP51800 RNU1-87P-201ENST00000363727 170 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 RNU6-549P-201ENST00000384433 107 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLCNKAP51800 AL136310.1-201ENST00000404926 654 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.47□□□□□ -1.69
CLCNKAP51800 AC009480.2-201ENST00000422916 432 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.47□□□□□ -1.69
CLCNKAP51800 MOB1AP1-201ENST00000430903 535 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 AC234064.1-201ENST00000436312 247 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 RPL23AP93-201ENST00000440847 484 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CLCNKAP51800 HMGB3P6-201ENST00000444896 598 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 AC112492.1-201ENST00000449607 712 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 AC009220.1-201ENST00000451614 275 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.47□□□□□ -1.69
CLCNKAP51800 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.47□□□□□ -1.69
CLCNKAP51800 MTND2P28-201ENST00000457540 1044 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 RPL7AP28-201ENST00000464513 571 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 AC091959.2-201ENST00000477363 321 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.47□□□□□ -1.69
CLCNKAP51800 BOLA3P3-201ENST00000505182 232 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 AC113430.1-201ENST00000506872 718 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.47□□□□□ -1.69
CLCNKAP51800 AC092593.2-201ENST00000513866 913 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 snoZ278.1-201ENST00000517059 112 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms