Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.74□□□□□ -1.81
BRCA2P51587 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.74□□□□□ -1.81
BRCA2P51587 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
BRCA2P51587 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
BRCA2P51587 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
BRCA2P51587 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
BRCA2P51587 RNU1-18P-201ENST00000363062 164 ntBASIC3.73□□□□□ -1.81
BRCA2P51587 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.73□□□□□ -1.81
BRCA2P51587 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
BRCA2P51587 RPS20P1-201ENST00000434853 354 ntBASIC3.73□□□□□ -1.81
BRCA2P51587 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.73□□□□□ -1.81
BRCA2P51587 AC109458.1-201ENST00000508858 316 ntBASIC3.73□□□□□ -1.81
BRCA2P51587 AC022080.3-201ENST00000544433 482 ntBASIC3.73□□□□□ -1.81
BRCA2P51587 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.73□□□□□ -1.81
BRCA2P51587 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
BRCA2P51587 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
BRCA2P51587 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
BRCA2P51587 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
BRCA2P51587 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
BRCA2P51587 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
BRCA2P51587 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC3.73□□□□□ -1.81
BRCA2P51587 VN1R8P-201ENST00000407739 893 ntBASIC3.73□□□□□ -1.81
BRCA2P51587 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC3.73□□□□□ -1.81
BRCA2P51587 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.73□□□□□ -1.81
BRCA2P51587 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
BRCA2P51587 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
BRCA2P51587 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
BRCA2P51587 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
BRCA2P51587 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
BRCA2P51587 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
BRCA2P51587 TXNP1-201ENST00000441872 371 ntBASIC3.73□□□□□ -1.81
BRCA2P51587 AC110794.1-201ENST00000505816 425 ntBASIC3.73□□□□□ -1.81
BRCA2P51587 AP006245.1-201ENST00000522549 120 ntBASIC3.73□□□□□ -1.81
BRCA2P51587 AC004024.1-201ENST00000549244 247 ntBASIC3.73□□□□□ -1.81
BRCA2P51587 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.73□□□□□ -1.81
BRCA2P51587 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.73□□□□□ -1.81
BRCA2P51587 AC018692.3-201ENST00000623929 123 ntBASIC3.73□□□□□ -1.81
BRCA2P51587 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.73□□□□□ -1.81
BRCA2P51587 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
BRCA2P51587 AC104581.5-201ENST00000624171 7141 ntBASIC3.73□□□□□ -1.81
BRCA2P51587 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
BRCA2P51587 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
BRCA2P51587 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
BRCA2P51587 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.72□□□□□ -1.81
BRCA2P51587 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.72□□□□□ -1.81
BRCA2P51587 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC3.72□□□□□ -1.81
BRCA2P51587 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
BRCA2P51587 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
BRCA2P51587 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
BRCA2P51587 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
BRCA2P51587 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.72□□□□□ -1.81
BRCA2P51587 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.72□□□□□ -1.81
BRCA2P51587 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.72□□□□□ -1.81
BRCA2P51587 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.72□□□□□ -1.81
BRCA2P51587 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.72□□□□□ -1.81
BRCA2P51587 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.72□□□□□ -1.81
BRCA2P51587 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
BRCA2P51587 UBE3AP2-201ENST00000429033 2259 ntBASIC3.72□□□□□ -1.81
BRCA2P51587 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
BRCA2P51587 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
BRCA2P51587 U3.12-201ENST00000364498 214 ntBASIC3.72□□□□□ -1.81
BRCA2P51587 NPM1P11-201ENST00000417106 855 ntBASIC3.72□□□□□ -1.81
BRCA2P51587 AC098824.1-201ENST00000453565 980 ntBASIC3.72□□□□□ -1.81
BRCA2P51587 RN7SL863P-201ENST00000462370 296 ntBASIC3.72□□□□□ -1.81
BRCA2P51587 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.72□□□□□ -1.81
BRCA2P51587 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.72□□□□□ -1.81
BRCA2P51587 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.72□□□□□ -1.81
BRCA2P51587 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.72□□□□□ -1.81
BRCA2P51587 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
BRCA2P51587 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
BRCA2P51587 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
BRCA2P51587 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
BRCA2P51587 PHACTR2P1-201ENST00000605639 1414 ntBASIC3.72□□□□□ -1.81
BRCA2P51587 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
BRCA2P51587 AL445529.1-201ENST00000398713 389 ntBASIC3.72□□□□□ -1.81
BRCA2P51587 RPL6P21-201ENST00000418672 846 ntBASIC3.72□□□□□ -1.81
BRCA2P51587 AL603825.1-201ENST00000438481 80 ntBASIC3.72□□□□□ -1.81
BRCA2P51587 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.72□□□□□ -1.81
BRCA2P51587 MIR2682-201ENST00000580305 110 ntBASIC3.72□□□□□ -1.81
BRCA2P51587 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
BRCA2P51587 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC3.71□□□□□ -1.82
BRCA2P51587 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
BRCA2P51587 AC104623.2-202ENST00000623477 4002 ntBASIC3.71□□□□□ -1.82
BRCA2P51587 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
BRCA2P51587 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
BRCA2P51587 AL356535.1-201ENST00000440335 398 ntBASIC3.71□□□□□ -1.82
BRCA2P51587 AC128713.1-201ENST00000471495 306 ntBASIC3.71□□□□□ -1.82
BRCA2P51587 AC026801.2-201ENST00000515352 425 ntBASIC3.71□□□□□ -1.82
BRCA2P51587 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
BRCA2P51587 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.71□□□□□ -1.82
BRCA2P51587 OR5AC4P-202ENST00000642086 985 ntBASIC3.71□□□□□ -1.82
BRCA2P51587 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
BRCA2P51587 AC006480.1-201ENST00000449887 378 ntBASIC3.71□□□□□ -1.82
BRCA2P51587 HMGN2P7-201ENST00000456186 273 ntBASIC3.71□□□□□ -1.82
BRCA2P51587 AL591473.1-201ENST00000464297 313 ntBASIC3.71□□□□□ -1.82
BRCA2P51587 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
BRCA2P51587 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.71□□□□□ -1.82
BRCA2P51587 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.71□□□□□ -1.82
BRCA2P51587 MIR4435-1-201ENST00000582552 80 ntBASIC3.71□□□□□ -1.82
BRCA2P51587 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms