Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.42□□□□□ -1.86
SRP9P49458 AL132838.2-201ENST00000492041 314 ntBASIC3.42□□□□□ -1.86
SRP9P49458 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.42□□□□□ -1.86
SRP9P49458 AL161713.1-201ENST00000555538 145 ntBASIC3.42□□□□□ -1.86
SRP9P49458 AC007224.1-201ENST00000564410 144 ntBASIC3.42□□□□□ -1.86
SRP9P49458 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.42□□□□□ -1.86
SRP9P49458 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.42□□□□□ -1.86
SRP9P49458 FAM106CP-201ENST00000582212 507 ntBASIC3.42□□□□□ -1.86
SRP9P49458 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.42□□□□□ -1.86
SRP9P49458 MIR6867-201ENST00000610636 67 ntBASIC3.42□□□□□ -1.86
SRP9P49458 ZYXP1-201ENST00000617638 118 ntBASIC3.42□□□□□ -1.86
SRP9P49458 AC092628.2-201ENST00000622492 339 ntBASIC3.42□□□□□ -1.86
SRP9P49458 AC016717.3-201ENST00000624730 554 ntBASIC3.42□□□□□ -1.86
SRP9P49458 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
SRP9P49458 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.42□□□□□ -1.86
SRP9P49458 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SRP9P49458 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SRP9P49458 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SRP9P49458 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SRP9P49458 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SRP9P49458 RLIMP1-201ENST00000339626 1680 ntBASIC3.41□□□□□ -1.86
SRP9P49458 RNU6-304P-201ENST00000364855 107 ntBASIC3.41□□□□□ -1.86
SRP9P49458 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SRP9P49458 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.41□□□□□ -1.86
SRP9P49458 AC127526.1-201ENST00000417526 366 ntBASIC3.41□□□□□ -1.86
SRP9P49458 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.41□□□□□ -1.86
SRP9P49458 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.41□□□□□ -1.86
SRP9P49458 RAB9AP5-201ENST00000437794 597 ntBASIC3.41□□□□□ -1.86
SRP9P49458 AC083863.1-201ENST00000438811 231 ntBASIC3.41□□□□□ -1.86
SRP9P49458 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.41□□□□□ -1.86
SRP9P49458 RAB9AP2-201ENST00000443911 597 ntBASIC3.41□□□□□ -1.86
SRP9P49458 AC006326.1-201ENST00000445465 787 ntBASIC3.41□□□□□ -1.86
SRP9P49458 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.41□□□□□ -1.86
SRP9P49458 RPL23AP14-201ENST00000468281 468 ntBASIC3.41□□□□□ -1.86
SRP9P49458 AC093267.1-201ENST00000489176 961 ntBASIC3.41□□□□□ -1.86
SRP9P49458 AL035404.1-201ENST00000497982 568 ntBASIC3.41□□□□□ -1.86
SRP9P49458 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.41□□□□□ -1.86
SRP9P49458 SNX5P1-201ENST00000505757 1041 ntBASIC3.41□□□□□ -1.86
SRP9P49458 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.41□□□□□ -1.86
SRP9P49458 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.41□□□□□ -1.86
SRP9P49458 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.41□□□□□ -1.86
SRP9P49458 RN7SKP83-201ENST00000516512 178 ntBASIC3.41□□□□□ -1.86
SRP9P49458 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.41□□□□□ -1.86
SRP9P49458 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.41□□□□□ -1.86
SRP9P49458 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.41□□□□□ -1.86
SRP9P49458 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.41□□□□□ -1.86
SRP9P49458 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.41□□□□□ -1.86
SRP9P49458 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.41□□□□□ -1.86
SRP9P49458 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.41□□□□□ -1.86
SRP9P49458 MIR3186-201ENST00000577404 85 ntBASIC3.41□□□□□ -1.86
SRP9P49458 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.41□□□□□ -1.86
SRP9P49458 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.41□□□□□ -1.86
SRP9P49458 AC006946.3-201ENST00000609791 756 ntBASIC3.41□□□□□ -1.86
SRP9P49458 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.41□□□□□ -1.86
SRP9P49458 MIR6868-201ENST00000611215 58 ntBASIC3.41□□□□□ -1.86
SRP9P49458 XIST_intron.1-201ENST00000619444 68 ntBASIC3.41□□□□□ -1.86
SRP9P49458 AC124312.6-202ENST00000623624 418 ntBASIC3.41□□□□□ -1.86
SRP9P49458 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SRP9P49458 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SRP9P49458 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.41□□□□□ -1.86
SRP9P49458 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.41□□□□□ -1.86
SRP9P49458 AC138393.1-206ENST00000540997 1886 ntBASIC3.41□□□□□ -1.86
SRP9P49458 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SRP9P49458 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SRP9P49458 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SRP9P49458 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.41□□□□□ -1.86
SRP9P49458 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SRP9P49458 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SRP9P49458 AP001148.1-201ENST00000624124 2359 ntBASIC3.4□□□□□ -1.86
SRP9P49458 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
SRP9P49458 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SRP9P49458 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SRP9P49458 RNU1-13P-201ENST00000384499 162 ntBASIC3.4□□□□□ -1.87
SRP9P49458 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SRP9P49458 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
SRP9P49458 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.4□□□□□ -1.87
SRP9P49458 RNU4-6P-201ENST00000410804 122 ntBASIC3.4□□□□□ -1.87
SRP9P49458 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.4□□□□□ -1.87
SRP9P49458 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.4□□□□□ -1.87
SRP9P49458 AC004975.1-201ENST00000428733 208 ntBASIC3.4□□□□□ -1.87
SRP9P49458 MTCO1P52-201ENST00000433928 531 ntBASIC3.4□□□□□ -1.87
SRP9P49458 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.4□□□□□ -1.87
SRP9P49458 AL356276.2-201ENST00000435919 558 ntBASIC3.4□□□□□ -1.87
SRP9P49458 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.4□□□□□ -1.87
SRP9P49458 RPL21P11-201ENST00000461458 483 ntBASIC3.4□□□□□ -1.87
SRP9P49458 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.4□□□□□ -1.87
SRP9P49458 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.4□□□□□ -1.87
SRP9P49458 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.4□□□□□ -1.87
SRP9P49458 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.4□□□□□ -1.87
SRP9P49458 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.4□□□□□ -1.87
SRP9P49458 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.4□□□□□ -1.87
SRP9P49458 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.4□□□□□ -1.87
SRP9P49458 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.4□□□□□ -1.87
SRP9P49458 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.4□□□□□ -1.87
SRP9P49458 AC092747.2-201ENST00000545069 983 ntBASIC3.4□□□□□ -1.87
SRP9P49458 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.4□□□□□ -1.87
SRP9P49458 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.4□□□□□ -1.87
SRP9P49458 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.4□□□□□ -1.87
SRP9P49458 AL390816.3-201ENST00000604527 1066 ntBASIC3.4□□□□□ -1.87
SRP9P49458 AL589935.2-201ENST00000616471 1231 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms