Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 ATP5J2P6-201ENST00000565203 266 ntBASIC4.73□□□□□ -1.65
PTPN9P43378 MIR3912-201ENST00000577566 105 ntBASIC4.73□□□□□ -1.65
PTPN9P43378 AC022662.1-201ENST00000580252 331 ntBASIC4.73□□□□□ -1.65
PTPN9P43378 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.73□□□□□ -1.65
PTPN9P43378 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.73□□□□□ -1.65
PTPN9P43378 AC090181.2-201ENST00000602975 672 ntBASIC4.73□□□□□ -1.65
PTPN9P43378 PSMA6P4-201ENST00000603247 718 ntBASIC4.73□□□□□ -1.65
PTPN9P43378 MTND3P19-201ENST00000603825 345 ntBASIC4.73□□□□□ -1.65
PTPN9P43378 AP002360.3-201ENST00000607673 710 ntBASIC4.73□□□□□ -1.65
PTPN9P43378 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.73□□□□□ -1.65
PTPN9P43378 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.73□□□□□ -1.65
PTPN9P43378 AC068057.2-201ENST00000624047 895 ntBASIC4.73□□□□□ -1.65
PTPN9P43378 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.73□□□□□ -1.65
PTPN9P43378 MTND2P41-201ENST00000637599 773 ntBASIC4.73□□□□□ -1.65
PTPN9P43378 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.73□□□□□ -1.65
PTPN9P43378 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PTPN9P43378 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
PTPN9P43378 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PTPN9P43378 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.73□□□□□ -1.65
PTPN9P43378 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PTPN9P43378 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PTPN9P43378 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
PTPN9P43378 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.72□□□□□ -1.65
PTPN9P43378 AC073429.2-201ENST00000569694 1444 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 AC092162.3-201ENST00000624511 1624 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTPN9P43378 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.72□□□□□ -1.65
PTPN9P43378 AC107027.3-201ENST00000565095 3473 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.72□□□□□ -1.65
PTPN9P43378 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTPN9P43378 AL512646.1-201ENST00000269395 1077 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 OR4K15-201ENST00000305051 1216 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTPN9P43378 snoZ40.1-201ENST00000364540 72 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 RNU6-707P-201ENST00000364647 95 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 RNU6-619P-201ENST00000365146 108 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PTPN9P43378 RNU2-65P-201ENST00000410162 185 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 RPL6P29-201ENST00000414863 865 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PTPN9P43378 AC019050.1-201ENST00000418508 492 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.72□□□□□ -1.65
PTPN9P43378 AC062016.2-201ENST00000420950 676 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.72□□□□□ -1.65
PTPN9P43378 ELOCP10-201ENST00000440624 327 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 RPL23AP93-201ENST00000440847 484 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.72□□□□□ -1.65
PTPN9P43378 SBDSP1-204ENST00000453858 737 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.72□□□□□ -1.65
PTPN9P43378 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.72□□□□□ -1.65
PTPN9P43378 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.72□□□□□ -1.65
PTPN9P43378 RNU6-347P-201ENST00000516658 105 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.72□□□□□ -1.65
PTPN9P43378 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.72□□□□□ -1.65
PTPN9P43378 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.72□□□□□ -1.65
PTPN9P43378 AP000827.1-201ENST00000527814 258 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 AP001781.1-201ENST00000530977 207 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.72□□□□□ -1.65
PTPN9P43378 AP006289.1-201ENST00000538089 277 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 RPL21P7-201ENST00000557463 483 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.72□□□□□ -1.65
PTPN9P43378 AP005119.2-201ENST00000579735 1105 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 AC069366.1-201ENST00000583159 838 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.72□□□□□ -1.65
PTPN9P43378 RN7SL52P-201ENST00000584271 284 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.72□□□□□ -1.65
PTPN9P43378 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.72□□□□□ -1.65
PTPN9P43378 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.72□□□□□ -1.65
PTPN9P43378 AC091057.2-201ENST00000602594 792 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 ELOCP34-201ENST00000604436 327 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
PTPN9P43378 AC010200.2-201ENST00000605098 235 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.72□□□□□ -1.65
PTPN9P43378 AP004247.3-201ENST00000608682 624 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 AC091905.2-201ENST00000623143 306 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.72□□□□□ -1.65
PTPN9P43378 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PTPN9P43378 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTPN9P43378 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTPN9P43378 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PTPN9P43378 AC139769.1-204ENST00000472297 1931 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 AL118496.1-201ENST00000440201 1812 ntBASIC4.72□□□□□ -1.65
PTPN9P43378 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.72□□□□□ -1.65
PTPN9P43378 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.72□□□□□ -1.65
PTPN9P43378 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTPN9P43378 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.71□□□□□ -1.65
PTPN9P43378 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
PTPN9P43378 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
PTPN9P43378 AP000756.2-201ENST00000624168 2567 ntBASIC4.71□□□□□ -1.65
PTPN9P43378 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
PTPN9P43378 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
PTPN9P43378 MFSD8-216ENST00000641147 4009 ntBASIC4.71□□□□□ -1.65
PTPN9P43378 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.71□□□□□ -1.65
PTPN9P43378 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PTPN9P43378 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PTPN9P43378 AC134882.1-201ENST00000603738 1676 ntBASIC4.71□□□□□ -1.66
PTPN9P43378 AC139713.2-215ENST00000641428 5037 ntBASIC4.71□□□□□ -1.66
PTPN9P43378 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
PTPN9P43378 AC103591.2-201ENST00000265259 766 ntBASIC4.71□□□□□ -1.66
PTPN9P43378 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms