Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HTTP42858 BTF3P9-201ENST00000418784 283 ntBASIC3.76□□□□□ -1.81
HTTP42858 MAPRE1P3-201ENST00000435438 796 ntBASIC3.76□□□□□ -1.81
HTTP42858 AL133477.1-201ENST00000457472 514 ntBASIC3.76□□□□□ -1.81
HTTP42858 AL360157.1-201ENST00000565962 87 ntBASIC3.76□□□□□ -1.81
HTTP42858 AC087241.4-201ENST00000612441 480 ntBASIC3.76□□□□□ -1.81
HTTP42858 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.76□□□□□ -1.81
HTTP42858 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.76□□□□□ -1.81
HTTP42858 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
HTTP42858 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
HTTP42858 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC3.76□□□□□ -1.81
HTTP42858 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HTTP42858 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
HTTP42858 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HTTP42858 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
HTTP42858 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
HTTP42858 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
HTTP42858 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HTTP42858 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC3.76□□□□□ -1.81
HTTP42858 AL031679.1-201ENST00000400616 525 ntBASIC3.76□□□□□ -1.81
HTTP42858 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.76□□□□□ -1.81
HTTP42858 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC3.76□□□□□ -1.81
HTTP42858 RN7SKP46-201ENST00000515942 234 ntBASIC3.76□□□□□ -1.81
HTTP42858 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.76□□□□□ -1.81
HTTP42858 MTND6P33-201ENST00000571794 183 ntBASIC3.76□□□□□ -1.81
HTTP42858 AC245100.7-201ENST00000609678 442 ntBASIC3.76□□□□□ -1.81
HTTP42858 AC231759.1-201ENST00000616455 597 ntBASIC3.76□□□□□ -1.81
HTTP42858 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
HTTP42858 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HTTP42858 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HTTP42858 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
HTTP42858 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HTTP42858 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
HTTP42858 AL359693.1-201ENST00000614959 2407 ntBASIC3.75□□□□□ -1.81
HTTP42858 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HTTP42858 AC073508.1-201ENST00000428866 656 ntBASIC3.75□□□□□ -1.81
HTTP42858 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.75□□□□□ -1.81
HTTP42858 AL513124.1-201ENST00000450410 614 ntBASIC3.75□□□□□ -1.81
HTTP42858 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.75□□□□□ -1.81
HTTP42858 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.75□□□□□ -1.81
HTTP42858 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.75□□□□□ -1.81
HTTP42858 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HTTP42858 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
HTTP42858 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HTTP42858 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
HTTP42858 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HTTP42858 HMGB3P20-201ENST00000417997 600 ntBASIC3.75□□□□□ -1.81
HTTP42858 AL139281.1-201ENST00000422120 335 ntBASIC3.75□□□□□ -1.81
HTTP42858 FDX1P2-201ENST00000450769 375 ntBASIC3.75□□□□□ -1.81
HTTP42858 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.75□□□□□ -1.81
HTTP42858 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.75□□□□□ -1.81
HTTP42858 LSM3P2-201ENST00000551246 273 ntBASIC3.75□□□□□ -1.81
HTTP42858 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HTTP42858 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
HTTP42858 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HTTP42858 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC3.75□□□□□ -1.81
HTTP42858 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.75□□□□□ -1.81
HTTP42858 YWHAEP4-201ENST00000505390 198 ntBASIC3.75□□□□□ -1.81
HTTP42858 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.75□□□□□ -1.81
HTTP42858 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.75□□□□□ -1.81
HTTP42858 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
HTTP42858 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HTTP42858 AL096803.3-201ENST00000609032 532 ntBASIC3.75□□□□□ -1.81
HTTP42858 A2MP1-204ENST00000566278 4130 ntBASIC3.74□□□□□ -1.81
HTTP42858 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HTTP42858 AC097504.1-201ENST00000515103 2415 ntBASIC3.74□□□□□ -1.81
HTTP42858 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HTTP42858 SNORA7.4-201ENST00000384249 137 ntBASIC3.74□□□□□ -1.81
HTTP42858 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.74□□□□□ -1.81
HTTP42858 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.74□□□□□ -1.81
HTTP42858 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.74□□□□□ -1.81
HTTP42858 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
HTTP42858 VN1R78P-201ENST00000597393 564 ntBASIC3.74□□□□□ -1.81
HTTP42858 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.74□□□□□ -1.81
HTTP42858 AC139713.2-210ENST00000641741 992 ntBASIC3.74□□□□□ -1.81
HTTP42858 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.74□□□□□ -1.81
HTTP42858 Z83843.1-201ENST00000604070 3685 ntBASIC3.74□□□□□ -1.81
HTTP42858 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC3.74□□□□□ -1.81
HTTP42858 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HTTP42858 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
HTTP42858 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HTTP42858 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.74□□□□□ -1.81
HTTP42858 AC005831.1-201ENST00000624384 1697 ntBASIC3.74□□□□□ -1.81
HTTP42858 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
HTTP42858 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HTTP42858 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HTTP42858 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.74□□□□□ -1.81
HTTP42858 AL356535.1-201ENST00000440335 398 ntBASIC3.74□□□□□ -1.81
HTTP42858 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.74□□□□□ -1.81
HTTP42858 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.74□□□□□ -1.81
HTTP42858 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.74□□□□□ -1.81
HTTP42858 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.74□□□□□ -1.81
HTTP42858 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.74□□□□□ -1.81
HTTP42858 AC067852.4-201ENST00000590314 478 ntBASIC3.74□□□□□ -1.81
HTTP42858 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HTTP42858 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HTTP42858 AC138393.1-206ENST00000540997 1886 ntBASIC3.74□□□□□ -1.81
HTTP42858 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
HTTP42858 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HTTP42858 EEF1A1P41-201ENST00000414667 207 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms