Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN4P29074 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN4P29074 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.22□□□□□ -1.73
PTPN4P29074 OR5P1P-201ENST00000299512 925 ntBASIC4.22□□□□□ -1.73
PTPN4P29074 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN4P29074 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.22□□□□□ -1.73
PTPN4P29074 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN4P29074 AL353692.2-201ENST00000407054 335 ntBASIC4.22□□□□□ -1.73
PTPN4P29074 RN7SKP263-201ENST00000411194 309 ntBASIC4.22□□□□□ -1.73
PTPN4P29074 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.22□□□□□ -1.73
PTPN4P29074 UBE2V1P3-201ENST00000439651 417 ntBASIC4.22□□□□□ -1.73
PTPN4P29074 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN4P29074 MTCYBP21-201ENST00000443300 1113 ntBASIC4.22□□□□□ -1.73
PTPN4P29074 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPN4P29074 RPS27P5-201ENST00000444247 244 ntBASIC4.22□□□□□ -1.73
PTPN4P29074 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN4P29074 RPL23AP43-201ENST00000446445 471 ntBASIC4.22□□□□□ -1.73
PTPN4P29074 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPN4P29074 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPN4P29074 AC053481.1-201ENST00000467217 306 ntBASIC4.22□□□□□ -1.73
PTPN4P29074 FTH1P24-201ENST00000503502 462 ntBASIC4.22□□□□□ -1.73
PTPN4P29074 OR5H4P-201ENST00000510851 923 ntBASIC4.22□□□□□ -1.73
PTPN4P29074 MTCO1P35-201ENST00000515270 228 ntBASIC4.22□□□□□ -1.73
PTPN4P29074 SNORA31.9-201ENST00000516429 84 ntBASIC4.22□□□□□ -1.73
PTPN4P29074 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.22□□□□□ -1.73
PTPN4P29074 HAUS1P3-201ENST00000523909 662 ntBASIC4.22□□□□□ -1.73
PTPN4P29074 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.22□□□□□ -1.73
PTPN4P29074 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.22□□□□□ -1.73
PTPN4P29074 AC015911.5-201ENST00000587076 451 ntBASIC4.22□□□□□ -1.73
PTPN4P29074 AC067852.4-201ENST00000590314 478 ntBASIC4.22□□□□□ -1.73
PTPN4P29074 AC025946.2-201ENST00000603398 234 ntBASIC4.22□□□□□ -1.73
PTPN4P29074 AL450270.1-201ENST00000606160 391 ntBASIC4.22□□□□□ -1.73
PTPN4P29074 AC011374.2-201ENST00000607135 526 ntBASIC4.22□□□□□ -1.73
PTPN4P29074 AC064801.1-201ENST00000612025 407 ntBASIC4.22□□□□□ -1.73
PTPN4P29074 AL356094.1-201ENST00000624663 1212 ntBASIC4.22□□□□□ -1.73
PTPN4P29074 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN4P29074 MTND5P11-201ENST00000511037 1812 ntBASIC4.22□□□□□ -1.73
PTPN4P29074 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.22□□□□□ -1.73
PTPN4P29074 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN4P29074 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.22□□□□□ -1.73
PTPN4P29074 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
PTPN4P29074 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.22□□□□□ -1.73
PTPN4P29074 AC138393.1-206ENST00000540997 1886 ntBASIC4.22□□□□□ -1.73
PTPN4P29074 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.21□□□□□ -1.73
PTPN4P29074 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
PTPN4P29074 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.21□□□□□ -1.73
PTPN4P29074 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
PTPN4P29074 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
PTPN4P29074 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PTPN4P29074 Y_RNA.126-201ENST00000363382 111 ntBASIC4.21□□□□□ -1.74
PTPN4P29074 RNU1-130P-201ENST00000363930 160 ntBASIC4.21□□□□□ -1.74
PTPN4P29074 MIR142-201ENST00000384835 87 ntBASIC4.21□□□□□ -1.74
PTPN4P29074 RPS26P8-201ENST00000393490 348 ntBASIC4.21□□□□□ -1.74
PTPN4P29074 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN4P29074 RPL23AP26-201ENST00000412728 464 ntBASIC4.21□□□□□ -1.74
PTPN4P29074 AL161631.1-201ENST00000417933 486 ntBASIC4.21□□□□□ -1.74
PTPN4P29074 ARL2BPP3-201ENST00000421226 480 ntBASIC4.21□□□□□ -1.74
PTPN4P29074 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PTPN4P29074 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN4P29074 AC073508.1-201ENST00000428866 656 ntBASIC4.21□□□□□ -1.74
PTPN4P29074 RPL7P28-201ENST00000437739 740 ntBASIC4.21□□□□□ -1.74
PTPN4P29074 YWHAQP9-201ENST00000445891 512 ntBASIC4.21□□□□□ -1.74
PTPN4P29074 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.21□□□□□ -1.74
PTPN4P29074 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN4P29074 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN4P29074 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN4P29074 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.21□□□□□ -1.74
PTPN4P29074 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.21□□□□□ -1.74
PTPN4P29074 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN4P29074 UQCRHP4-201ENST00000471686 272 ntBASIC4.21□□□□□ -1.74
PTPN4P29074 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PTPN4P29074 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.21□□□□□ -1.74
PTPN4P29074 AC105137.1-201ENST00000484355 562 ntBASIC4.21□□□□□ -1.74
PTPN4P29074 AC069499.1-201ENST00000489433 509 ntBASIC4.21□□□□□ -1.74
PTPN4P29074 RPL23AP73-201ENST00000492507 471 ntBASIC4.21□□□□□ -1.74
PTPN4P29074 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.21□□□□□ -1.74
PTPN4P29074 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.21□□□□□ -1.74
PTPN4P29074 MTND3P24-201ENST00000506306 329 ntBASIC4.21□□□□□ -1.74
PTPN4P29074 AC010468.3-201ENST00000508225 458 ntBASIC4.21□□□□□ -1.74
PTPN4P29074 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTPN4P29074 MRPL49P2-201ENST00000521066 465 ntBASIC4.21□□□□□ -1.74
PTPN4P29074 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN4P29074 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN4P29074 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN4P29074 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN4P29074 AC141257.3-201ENST00000572906 215 ntBASIC4.21□□□□□ -1.74
PTPN4P29074 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN4P29074 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PTPN4P29074 AC006213.5-201ENST00000619673 288 ntBASIC4.21□□□□□ -1.74
PTPN4P29074 MIR7702-201ENST00000621931 59 ntBASIC4.21□□□□□ -1.74
PTPN4P29074 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.21□□□□□ -1.74
PTPN4P29074 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.21□□□□□ -1.74
PTPN4P29074 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTPN4P29074 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
PTPN4P29074 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.21□□□□□ -1.74
PTPN4P29074 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTPN4P29074 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
PTPN4P29074 AC022031.1-201ENST00000585985 2593 ntBASIC4.2□□□□□ -1.74
PTPN4P29074 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
PTPN4P29074 RN7SKP44-201ENST00000363602 316 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms