Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
ATF4P18848 RNA5SP472-201ENST00000363868 119 ntBASIC5.4□□□□□ -1.54
ATF4P18848 CYB5AP4-201ENST00000396692 399 ntBASIC5.4□□□□□ -1.54
ATF4P18848 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
ATF4P18848 RNU4-78P-201ENST00000410940 126 ntBASIC5.4□□□□□ -1.54
ATF4P18848 RNU6-516P-201ENST00000411381 104 ntBASIC5.4□□□□□ -1.54
ATF4P18848 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC5.4□□□□□ -1.54
ATF4P18848 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
ATF4P18848 MRPL50P2-201ENST00000416821 482 ntBASIC5.4□□□□□ -1.54
ATF4P18848 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
ATF4P18848 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC5.4□□□□□ -1.54
ATF4P18848 PPIL1P1-201ENST00000423936 499 ntBASIC5.4□□□□□ -1.54
ATF4P18848 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC5.4□□□□□ -1.54
ATF4P18848 HMGN2P27-201ENST00000427352 270 ntBASIC5.4□□□□□ -1.54
ATF4P18848 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.4□□□□□ -1.54
ATF4P18848 OR3D1P-201ENST00000438288 955 ntBASIC5.4□□□□□ -1.54
ATF4P18848 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.4□□□□□ -1.54
ATF4P18848 AC079781.1-201ENST00000441505 394 ntBASIC5.4□□□□□ -1.54
ATF4P18848 AC239800.1-201ENST00000442049 719 ntBASIC5.4□□□□□ -1.54
ATF4P18848 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.4□□□□□ -1.54
ATF4P18848 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.4□□□□□ -1.54
ATF4P18848 HMGB1P25-201ENST00000468402 607 ntBASIC5.4□□□□□ -1.54
ATF4P18848 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
ATF4P18848 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC5.4□□□□□ -1.54
ATF4P18848 AC016559.2-201ENST00000510759 359 ntBASIC5.4□□□□□ -1.54
ATF4P18848 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.4□□□□□ -1.54
ATF4P18848 RPS23-208ENST00000512493 443 ntTSL 3 BASIC5.4□□□□□ -1.54
ATF4P18848 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.4□□□□□ -1.54
ATF4P18848 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC5.4□□□□□ -1.54
ATF4P18848 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.4□□□□□ -1.54
ATF4P18848 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC5.4□□□□□ -1.54
ATF4P18848 AC104383.1-201ENST00000530297 370 ntBASIC5.4□□□□□ -1.54
ATF4P18848 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.4□□□□□ -1.54
ATF4P18848 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.4□□□□□ -1.54
ATF4P18848 RPL21P12-201ENST00000559810 515 ntBASIC5.4□□□□□ -1.54
ATF4P18848 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.4□□□□□ -1.54
ATF4P18848 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.4□□□□□ -1.54
ATF4P18848 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.4□□□□□ -1.54
ATF4P18848 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.4□□□□□ -1.54
ATF4P18848 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.4□□□□□ -1.54
ATF4P18848 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.4□□□□□ -1.54
ATF4P18848 PTCHD3P1-201ENST00000612350 537 ntBASIC5.4□□□□□ -1.54
ATF4P18848 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.4□□□□□ -1.54
ATF4P18848 DUXAP9-208ENST00000622815 614 ntBASIC5.4□□□□□ -1.54
ATF4P18848 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.4□□□□□ -1.54
ATF4P18848 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
ATF4P18848 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.4□□□□□ -1.54
ATF4P18848 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
ATF4P18848 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
ATF4P18848 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.4□□□□□ -1.55
ATF4P18848 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC5.4□□□□□ -1.55
ATF4P18848 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
ATF4P18848 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.4□□□□□ -1.55
ATF4P18848 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
ATF4P18848 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
ATF4P18848 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.4□□□□□ -1.55
ATF4P18848 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
ATF4P18848 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
ATF4P18848 NXPH1-205ENST00000602349 1953 ntBASIC5.4□□□□□ -1.55
ATF4P18848 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
ATF4P18848 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.4□□□□□ -1.55
ATF4P18848 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ATF4P18848 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ATF4P18848 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
ATF4P18848 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ATF4P18848 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
ATF4P18848 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.39□□□□□ -1.55
ATF4P18848 NMD3P1-201ENST00000439704 1488 ntBASIC5.39□□□□□ -1.55
ATF4P18848 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.39□□□□□ -1.55
ATF4P18848 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.39□□□□□ -1.55
ATF4P18848 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
ATF4P18848 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ATF4P18848 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ATF4P18848 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.39□□□□□ -1.55
ATF4P18848 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ATF4P18848 RNU6-263P-201ENST00000363811 107 ntBASIC5.39□□□□□ -1.55
ATF4P18848 RNA5SP396-201ENST00000364834 120 ntBASIC5.39□□□□□ -1.55
ATF4P18848 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
ATF4P18848 RNU6-837P-201ENST00000391056 108 ntBASIC5.39□□□□□ -1.55
ATF4P18848 RNU6-876P-201ENST00000391295 104 ntBASIC5.39□□□□□ -1.55
ATF4P18848 RPL9P21-201ENST00000392269 505 ntBASIC5.39□□□□□ -1.55
ATF4P18848 RPS4XP8-201ENST00000402039 771 ntBASIC5.39□□□□□ -1.55
ATF4P18848 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.39□□□□□ -1.55
ATF4P18848 RN7SKP254-201ENST00000410685 310 ntBASIC5.39□□□□□ -1.55
ATF4P18848 AMD1P2-201ENST00000412936 992 ntBASIC5.39□□□□□ -1.55
ATF4P18848 HMGA1P8-201ENST00000414130 321 ntBASIC5.39□□□□□ -1.55
ATF4P18848 AL353193.1-201ENST00000421444 268 ntBASIC5.39□□□□□ -1.55
ATF4P18848 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
ATF4P18848 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ATF4P18848 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.39□□□□□ -1.55
ATF4P18848 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC5.39□□□□□ -1.55
ATF4P18848 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC5.39□□□□□ -1.55
ATF4P18848 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ATF4P18848 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.39□□□□□ -1.55
ATF4P18848 RPL36AP55-201ENST00000454114 305 ntBASIC5.39□□□□□ -1.55
ATF4P18848 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC5.39□□□□□ -1.55
ATF4P18848 RPS10P28-201ENST00000480396 498 ntBASIC5.39□□□□□ -1.55
ATF4P18848 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC5.39□□□□□ -1.55
ATF4P18848 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.39□□□□□ -1.55
ATF4P18848 AC008549.1-201ENST00000512900 643 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms