Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RPS11P1-201ENST00000451072 473 ntBASIC4.22□□□□□ -1.73
TPM1P09493 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.22□□□□□ -1.73
TPM1P09493 RN7SL610P-201ENST00000463845 291 ntBASIC4.22□□□□□ -1.73
TPM1P09493 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
TPM1P09493 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.22□□□□□ -1.73
TPM1P09493 AC026784.1-201ENST00000507986 352 ntBASIC4.22□□□□□ -1.73
TPM1P09493 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.22□□□□□ -1.73
TPM1P09493 AC034244.2-201ENST00000514668 858 ntBASIC4.22□□□□□ -1.73
TPM1P09493 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.22□□□□□ -1.73
TPM1P09493 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TPM1P09493 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.22□□□□□ -1.73
TPM1P09493 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.22□□□□□ -1.73
TPM1P09493 AC006116.5-201ENST00000591936 559 ntBASIC4.22□□□□□ -1.73
TPM1P09493 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.22□□□□□ -1.73
TPM1P09493 AL356218.2-201ENST00000605264 187 ntBASIC4.22□□□□□ -1.73
TPM1P09493 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.22□□□□□ -1.73
TPM1P09493 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.22□□□□□ -1.73
TPM1P09493 AC008121.2-201ENST00000614647 523 ntBASIC4.22□□□□□ -1.73
TPM1P09493 MIR3653-201ENST00000625572 110 ntBASIC4.22□□□□□ -1.73
TPM1P09493 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.22□□□□□ -1.73
TPM1P09493 OR6C71P-202ENST00000641886 1107 ntBASIC4.22□□□□□ -1.73
TPM1P09493 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
TPM1P09493 AC005261.4-201ENST00000600047 1385 ntBASIC4.22□□□□□ -1.73
TPM1P09493 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TPM1P09493 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.22□□□□□ -1.73
TPM1P09493 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TPM1P09493 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TPM1P09493 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TPM1P09493 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.21□□□□□ -1.74
TPM1P09493 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TPM1P09493 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TPM1P09493 MIR184-201ENST00000384962 84 ntBASIC4.21□□□□□ -1.74
TPM1P09493 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
TPM1P09493 ENSAP1-201ENST00000392855 326 ntBASIC4.21□□□□□ -1.74
TPM1P09493 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.21□□□□□ -1.74
TPM1P09493 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.21□□□□□ -1.74
TPM1P09493 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.21□□□□□ -1.74
TPM1P09493 HIGD1AP12-201ENST00000427832 281 ntBASIC4.21□□□□□ -1.74
TPM1P09493 DNAJC19P7-201ENST00000428811 344 ntBASIC4.21□□□□□ -1.74
TPM1P09493 UBE2V2P1-201ENST00000434717 398 ntBASIC4.21□□□□□ -1.74
TPM1P09493 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.21□□□□□ -1.74
TPM1P09493 RPS29P31-201ENST00000446147 164 ntBASIC4.21□□□□□ -1.74
TPM1P09493 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.21□□□□□ -1.74
TPM1P09493 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.21□□□□□ -1.74
TPM1P09493 ARL2BPP6-201ENST00000512757 439 ntBASIC4.21□□□□□ -1.74
TPM1P09493 RNA5SP179-201ENST00000517284 121 ntBASIC4.21□□□□□ -1.74
TPM1P09493 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.21□□□□□ -1.74
TPM1P09493 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.21□□□□□ -1.74
TPM1P09493 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.21□□□□□ -1.74
TPM1P09493 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.21□□□□□ -1.74
TPM1P09493 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.21□□□□□ -1.74
TPM1P09493 AP003117.1-201ENST00000602771 554 ntBASIC4.21□□□□□ -1.74
TPM1P09493 AL137849.1-201ENST00000604767 169 ntBASIC4.21□□□□□ -1.74
TPM1P09493 AC091167.4-201ENST00000605079 184 ntBASIC4.21□□□□□ -1.74
TPM1P09493 AL365503.1-201ENST00000605247 905 ntBASIC4.21□□□□□ -1.74
TPM1P09493 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.21□□□□□ -1.74
TPM1P09493 MIR7153-201ENST00000637758 57 ntBASIC4.21□□□□□ -1.74
TPM1P09493 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.21□□□□□ -1.74
TPM1P09493 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.21□□□□□ -1.74
TPM1P09493 RIOK3P1-201ENST00000418778 1528 ntBASIC4.21□□□□□ -1.74
TPM1P09493 DCAF13P1-201ENST00000495256 1330 ntBASIC4.21□□□□□ -1.74
TPM1P09493 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
TPM1P09493 RNU6-618P-201ENST00000363518 112 ntBASIC4.2□□□□□ -1.74
TPM1P09493 SNORD6-201ENST00000365444 73 ntBASIC4.2□□□□□ -1.74
TPM1P09493 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.2□□□□□ -1.74
TPM1P09493 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.2□□□□□ -1.74
TPM1P09493 RNU6-328P-201ENST00000390887 106 ntBASIC4.2□□□□□ -1.74
TPM1P09493 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.2□□□□□ -1.74
TPM1P09493 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.2□□□□□ -1.74
TPM1P09493 BTF3P9-201ENST00000418784 283 ntBASIC4.2□□□□□ -1.74
TPM1P09493 RPS27AP7-201ENST00000422792 455 ntBASIC4.2□□□□□ -1.74
TPM1P09493 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TPM1P09493 MTCO1P45-201ENST00000431457 267 ntBASIC4.2□□□□□ -1.74
TPM1P09493 OR6C71P-201ENST00000432580 913 ntBASIC4.2□□□□□ -1.74
TPM1P09493 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.2□□□□□ -1.74
TPM1P09493 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
TPM1P09493 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.2□□□□□ -1.74
TPM1P09493 NDUFA12P1-201ENST00000455914 406 ntBASIC4.2□□□□□ -1.74
TPM1P09493 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.2□□□□□ -1.74
TPM1P09493 SNX5P1-201ENST00000505757 1041 ntBASIC4.2□□□□□ -1.74
TPM1P09493 IGKV2-23-201ENST00000518729 323 ntBASIC4.2□□□□□ -1.74
TPM1P09493 AC087369.1-201ENST00000520775 996 ntBASIC4.2□□□□□ -1.74
TPM1P09493 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.2□□□□□ -1.74
TPM1P09493 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.2□□□□□ -1.74
TPM1P09493 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.2□□□□□ -1.74
TPM1P09493 AP003117.2-201ENST00000606010 545 ntBASIC4.2□□□□□ -1.74
TPM1P09493 AC103710.3-201ENST00000608157 948 ntBASIC4.2□□□□□ -1.74
TPM1P09493 RMST_8.1-201ENST00000610287 165 ntBASIC4.2□□□□□ -1.74
TPM1P09493 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.2□□□□□ -1.74
TPM1P09493 AC139713.2-214ENST00000642059 1811 ntBASIC4.2□□□□□ -1.74
TPM1P09493 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TPM1P09493 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TPM1P09493 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TPM1P09493 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.2□□□□□ -1.74
TPM1P09493 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.2□□□□□ -1.74
TPM1P09493 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.2□□□□□ -1.74
TPM1P09493 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TPM1P09493 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TPM1P09493 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TPM1P09493 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms