Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 SDR42E1P1-201ENST00000611327 477 ntBASIC2.88□□□□□ -1.95
CXCL1P09341 AC090510.2-201ENST00000617465 629 ntBASIC2.88□□□□□ -1.95
CXCL1P09341 AL357559.1-201ENST00000622228 274 ntBASIC2.88□□□□□ -1.95
CXCL1P09341 AC011944.2-201ENST00000624440 683 ntBASIC2.88□□□□□ -1.95
CXCL1P09341 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.88□□□□□ -1.95
CXCL1P09341 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CXCL1P09341 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.88□□□□□ -1.95
CXCL1P09341 AC007496.3-201ENST00000624987 3443 ntBASIC2.88□□□□□ -1.95
CXCL1P09341 AL132640.2-201ENST00000559968 1698 ntBASIC2.88□□□□□ -1.95
CXCL1P09341 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CXCL1P09341 DCAF13P3-201ENST00000561147 1334 ntBASIC2.88□□□□□ -1.95
CXCL1P09341 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CXCL1P09341 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CXCL1P09341 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
CXCL1P09341 AL137100.1-201ENST00000556703 1620 ntBASIC2.87□□□□□ -1.95
CXCL1P09341 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC2.87□□□□□ -1.95
CXCL1P09341 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
CXCL1P09341 AL161909.1-201ENST00000397390 712 ntBASIC2.87□□□□□ -1.95
CXCL1P09341 AL133270.1-201ENST00000402635 279 ntBASIC2.87□□□□□ -1.95
CXCL1P09341 MTHFD2P2-201ENST00000407725 247 ntBASIC2.87□□□□□ -1.95
CXCL1P09341 HSPE1P12-201ENST00000412576 301 ntBASIC2.87□□□□□ -1.95
CXCL1P09341 AL590806.1-201ENST00000415818 853 ntBASIC2.87□□□□□ -1.95
CXCL1P09341 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC2.87□□□□□ -1.95
CXCL1P09341 AC108032.1-201ENST00000416706 207 ntBASIC2.87□□□□□ -1.95
CXCL1P09341 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC2.87□□□□□ -1.95
CXCL1P09341 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.87□□□□□ -1.95
CXCL1P09341 OSTCP5-201ENST00000425293 453 ntBASIC2.87□□□□□ -1.95
CXCL1P09341 OR5BE1P-201ENST00000425977 939 ntBASIC2.87□□□□□ -1.95
CXCL1P09341 HIGD1AP12-201ENST00000427832 281 ntBASIC2.87□□□□□ -1.95
CXCL1P09341 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC2.87□□□□□ -1.95
CXCL1P09341 RPS3AP54-201ENST00000435535 734 ntBASIC2.87□□□□□ -1.95
CXCL1P09341 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC2.87□□□□□ -1.95
CXCL1P09341 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.87□□□□□ -1.95
CXCL1P09341 CFTRP1-201ENST00000456646 183 ntBASIC2.87□□□□□ -1.95
CXCL1P09341 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC2.87□□□□□ -1.95
CXCL1P09341 RPL21P11-201ENST00000461458 483 ntBASIC2.87□□□□□ -1.95
CXCL1P09341 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.87□□□□□ -1.95
CXCL1P09341 AC078785.3-201ENST00000476607 425 ntBASIC2.87□□□□□ -1.95
CXCL1P09341 AC012170.1-201ENST00000495139 359 ntBASIC2.87□□□□□ -1.95
CXCL1P09341 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC2.87□□□□□ -1.95
CXCL1P09341 AC023050.1-201ENST00000498198 304 ntBASIC2.87□□□□□ -1.95
CXCL1P09341 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.87□□□□□ -1.95
CXCL1P09341 AK3P4-201ENST00000504283 583 ntBASIC2.87□□□□□ -1.95
CXCL1P09341 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC2.87□□□□□ -1.95
CXCL1P09341 RN7SKP92-201ENST00000517266 244 ntBASIC2.87□□□□□ -1.95
CXCL1P09341 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
CXCL1P09341 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC2.87□□□□□ -1.95
CXCL1P09341 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC2.87□□□□□ -1.95
CXCL1P09341 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CXCL1P09341 AP000919.1-202ENST00000581139 1264 ntBASIC2.87□□□□□ -1.95
CXCL1P09341 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC2.87□□□□□ -1.95
CXCL1P09341 AC006116.5-201ENST00000591936 559 ntBASIC2.87□□□□□ -1.95
CXCL1P09341 AC020915.5-201ENST00000596836 964 ntBASIC2.87□□□□□ -1.95
CXCL1P09341 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC2.87□□□□□ -1.95
CXCL1P09341 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC2.87□□□□□ -1.95
CXCL1P09341 AC099778.2-201ENST00000610904 211 ntBASIC2.87□□□□□ -1.95
CXCL1P09341 AL049539.1-201ENST00000611964 459 ntBASIC2.87□□□□□ -1.95
CXCL1P09341 AC091953.3-201ENST00000623220 236 ntBASIC2.87□□□□□ -1.95
CXCL1P09341 RFC1-217ENST00000639695 867 ntTSL 5 BASIC2.87□□□□□ -1.95
CXCL1P09341 OR5BE1P-202ENST00000641168 1176 ntBASIC2.87□□□□□ -1.95
CXCL1P09341 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CXCL1P09341 AL021368.2-201ENST00000606125 5352 ntBASIC2.87□□□□□ -1.95
CXCL1P09341 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC2.87□□□□□ -1.95
CXCL1P09341 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CXCL1P09341 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CXCL1P09341 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.86□□□□□ -1.95
CXCL1P09341 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
CXCL1P09341 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CXCL1P09341 RNA5SP399-201ENST00000364003 117 ntBASIC2.86□□□□□ -1.95
CXCL1P09341 RNU1-132P-201ENST00000364300 164 ntBASIC2.86□□□□□ -1.95
CXCL1P09341 RNA5SP366-201ENST00000365454 123 ntBASIC2.86□□□□□ -1.95
CXCL1P09341 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CXCL1P09341 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CXCL1P09341 AL035419.1-201ENST00000397037 564 ntBASIC2.86□□□□□ -1.95
CXCL1P09341 AC016397.1-201ENST00000412463 242 ntBASIC2.86□□□□□ -1.95
CXCL1P09341 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC2.86□□□□□ -1.95
CXCL1P09341 AC245291.1-201ENST00000419501 328 ntBASIC2.86□□□□□ -1.95
CXCL1P09341 TRGV7-201ENST00000427089 353 ntBASIC2.86□□□□□ -1.95
CXCL1P09341 FAR1P1-201ENST00000427163 934 ntBASIC2.86□□□□□ -1.95
CXCL1P09341 AC009969.1-201ENST00000438726 172 ntBASIC2.86□□□□□ -1.95
CXCL1P09341 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CXCL1P09341 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC2.86□□□□□ -1.95
CXCL1P09341 TVP23BP2-201ENST00000455082 615 ntBASIC2.86□□□□□ -1.95
CXCL1P09341 RPS27AP13-201ENST00000498403 237 ntBASIC2.86□□□□□ -1.95
CXCL1P09341 AC111000.3-201ENST00000508057 576 ntBASIC2.86□□□□□ -1.95
CXCL1P09341 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CXCL1P09341 POU5F1P7-201ENST00000508759 541 ntBASIC2.86□□□□□ -1.95
CXCL1P09341 SNORA64.4-201ENST00000516632 81 ntBASIC2.86□□□□□ -1.95
CXCL1P09341 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.86□□□□□ -1.95
CXCL1P09341 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.86□□□□□ -1.95
CXCL1P09341 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC2.86□□□□□ -1.95
CXCL1P09341 AC044860.2-201ENST00000561005 179 ntBASIC2.86□□□□□ -1.95
CXCL1P09341 MIR4436B2-201ENST00000581415 91 ntBASIC2.86□□□□□ -1.95
CXCL1P09341 MIR4436B1-201ENST00000583272 91 ntBASIC2.86□□□□□ -1.95
CXCL1P09341 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.86□□□□□ -1.95
CXCL1P09341 AC116651.1-201ENST00000609724 556 ntBASIC2.86□□□□□ -1.95
CXCL1P09341 AL589935.2-201ENST00000616471 1231 ntBASIC2.86□□□□□ -1.95
CXCL1P09341 AC099669.2-201ENST00000616549 437 ntBASIC2.86□□□□□ -1.95
CXCL1P09341 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.86□□□□□ -1.95
CXCL1P09341 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms