Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC005002.1-201ENST00000447458 540 ntBASIC4.73□□□□□ -1.65
RB1P06400 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.73□□□□□ -1.65
RB1P06400 snoU13.22-201ENST00000459428 104 ntBASIC4.73□□□□□ -1.65
RB1P06400 MTND6P6-201ENST00000478031 263 ntBASIC4.73□□□□□ -1.65
RB1P06400 AC104982.1-201ENST00000478775 574 ntBASIC4.73□□□□□ -1.65
RB1P06400 RPS27AP13-201ENST00000498403 237 ntBASIC4.73□□□□□ -1.65
RB1P06400 RNA5SP497-201ENST00000516081 97 ntBASIC4.73□□□□□ -1.65
RB1P06400 AC010376.1-201ENST00000522101 334 ntBASIC4.73□□□□□ -1.65
RB1P06400 AC006518.2-201ENST00000542513 940 ntBASIC4.73□□□□□ -1.65
RB1P06400 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.73□□□□□ -1.65
RB1P06400 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.73□□□□□ -1.65
RB1P06400 AC053481.3-201ENST00000577881 843 ntBASIC4.73□□□□□ -1.65
RB1P06400 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.73□□□□□ -1.65
RB1P06400 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.73□□□□□ -1.65
RB1P06400 VN1R88P-201ENST00000596787 292 ntBASIC4.73□□□□□ -1.65
RB1P06400 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.73□□□□□ -1.65
RB1P06400 AC093673.2-201ENST00000609674 331 ntBASIC4.73□□□□□ -1.65
RB1P06400 MIR6891-201ENST00000618788 93 ntBASIC4.73□□□□□ -1.65
RB1P06400 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RB1P06400 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.73□□□□□ -1.65
RB1P06400 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
RB1P06400 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RB1P06400 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.73□□□□□ -1.65
RB1P06400 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RB1P06400 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RB1P06400 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RB1P06400 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
RB1P06400 AL049737.1-201ENST00000413920 1403 ntBASIC4.72□□□□□ -1.65
RB1P06400 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RB1P06400 AC107068.1-201ENST00000563286 4218 ntBASIC4.72□□□□□ -1.65
RB1P06400 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RB1P06400 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.72□□□□□ -1.65
RB1P06400 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
RB1P06400 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RB1P06400 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RB1P06400 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.72□□□□□ -1.65
RB1P06400 AC008549.2-201ENST00000333482 706 ntBASIC4.72□□□□□ -1.65
RB1P06400 RNA5SP513-201ENST00000364648 118 ntBASIC4.72□□□□□ -1.65
RB1P06400 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.72□□□□□ -1.65
RB1P06400 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.72□□□□□ -1.65
RB1P06400 RNU2-65P-201ENST00000410162 185 ntBASIC4.72□□□□□ -1.65
RB1P06400 AC009237.10-201ENST00000414112 510 ntBASIC4.72□□□□□ -1.65
RB1P06400 MTND2P15-201ENST00000418575 892 ntBASIC4.72□□□□□ -1.65
RB1P06400 AL139095.3-201ENST00000419672 1203 ntBASIC4.72□□□□□ -1.65
RB1P06400 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.72□□□□□ -1.65
RB1P06400 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.72□□□□□ -1.65
RB1P06400 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.72□□□□□ -1.65
RB1P06400 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.72□□□□□ -1.65
RB1P06400 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.72□□□□□ -1.65
RB1P06400 BTF3P10-201ENST00000433415 495 ntBASIC4.72□□□□□ -1.65
RB1P06400 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.72□□□□□ -1.65
RB1P06400 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.72□□□□□ -1.65
RB1P06400 RPL21P89-201ENST00000444021 467 ntBASIC4.72□□□□□ -1.65
RB1P06400 GEMIN8P3-201ENST00000445417 720 ntBASIC4.72□□□□□ -1.65
RB1P06400 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RB1P06400 AL031584.1-201ENST00000447169 754 ntBASIC4.72□□□□□ -1.65
RB1P06400 VN1R34P-201ENST00000447387 883 ntBASIC4.72□□□□□ -1.65
RB1P06400 IFNWP4-201ENST00000453148 294 ntBASIC4.72□□□□□ -1.65
RB1P06400 BX248409.1-201ENST00000455497 255 ntBASIC4.72□□□□□ -1.65
RB1P06400 RNU7-140P-201ENST00000459546 60 ntBASIC4.72□□□□□ -1.65
RB1P06400 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.72□□□□□ -1.65
RB1P06400 AC090686.1-201ENST00000481577 749 ntBASIC4.72□□□□□ -1.65
RB1P06400 RN7SL812P-201ENST00000493791 279 ntBASIC4.72□□□□□ -1.65
RB1P06400 RN7SL691P-201ENST00000494487 301 ntBASIC4.72□□□□□ -1.65
RB1P06400 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.72□□□□□ -1.65
RB1P06400 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RB1P06400 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.72□□□□□ -1.65
RB1P06400 AC108064.1-201ENST00000513791 460 ntBASIC4.72□□□□□ -1.65
RB1P06400 RNA5SP249-201ENST00000516127 99 ntBASIC4.72□□□□□ -1.65
RB1P06400 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.72□□□□□ -1.65
RB1P06400 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.72□□□□□ -1.65
RB1P06400 AC118942.1-201ENST00000529674 1035 ntBASIC4.72□□□□□ -1.65
RB1P06400 AC124293.1-201ENST00000530034 493 ntBASIC4.72□□□□□ -1.65
RB1P06400 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.72□□□□□ -1.65
RB1P06400 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.72□□□□□ -1.65
RB1P06400 AC023762.1-201ENST00000603280 584 ntBASIC4.72□□□□□ -1.65
RB1P06400 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.72□□□□□ -1.65
RB1P06400 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.72□□□□□ -1.65
RB1P06400 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.72□□□□□ -1.65
RB1P06400 LINC00901.1-201ENST00000617252 152 ntBASIC4.72□□□□□ -1.65
RB1P06400 AC018926.3-201ENST00000618841 406 ntBASIC4.72□□□□□ -1.65
RB1P06400 MIR6075-201ENST00000620782 95 ntBASIC4.72□□□□□ -1.65
RB1P06400 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.72□□□□□ -1.65
RB1P06400 AL121594.5-201ENST00000631724 573 ntBASIC4.72□□□□□ -1.65
RB1P06400 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RB1P06400 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RB1P06400 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RB1P06400 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
RB1P06400 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RB1P06400 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RB1P06400 AL731532.2-201ENST00000623542 1953 ntBASIC4.71□□□□□ -1.66
RB1P06400 AC074029.4-201ENST00000624796 1859 ntBASIC4.71□□□□□ -1.66
RB1P06400 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RB1P06400 AL022393.1-201ENST00000625142 1677 ntBASIC4.71□□□□□ -1.66
RB1P06400 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
RB1P06400 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.71□□□□□ -1.66
RB1P06400 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RB1P06400 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RB1P06400 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RB1P06400 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms