Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
APOBP04114 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
APOBP04114 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC2.17□□□□□ -2.06
APOBP04114 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC2.17□□□□□ -2.06
APOBP04114 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
APOBP04114 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
APOBP04114 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC2.17□□□□□ -2.06
APOBP04114 AC097504.1-201ENST00000515103 2415 ntBASIC2.17□□□□□ -2.06
APOBP04114 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
APOBP04114 BMS1P22-201ENST00000414726 313 ntBASIC2.17□□□□□ -2.06
APOBP04114 OR1AA1P-201ENST00000419597 916 ntBASIC2.17□□□□□ -2.06
APOBP04114 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.17□□□□□ -2.06
APOBP04114 AC006480.1-201ENST00000449887 378 ntBASIC2.17□□□□□ -2.06
APOBP04114 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.17□□□□□ -2.06
APOBP04114 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.17□□□□□ -2.06
APOBP04114 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
APOBP04114 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC2.16□□□□□ -2.06
APOBP04114 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
APOBP04114 AL021877.2-201ENST00000624442 10684 ntBASIC2.16□□□□□ -2.06
APOBP04114 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
APOBP04114 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
APOBP04114 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC2.16□□□□□ -2.06
APOBP04114 HMGN2P7-201ENST00000456186 273 ntBASIC2.16□□□□□ -2.06
APOBP04114 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
APOBP04114 AL133247.2-201ENST00000603236 482 ntBASIC2.16□□□□□ -2.06
APOBP04114 AC112503.1-201ENST00000608436 391 ntBASIC2.16□□□□□ -2.06
APOBP04114 AL773545.4-201ENST00000637262 310 ntBASIC2.16□□□□□ -2.06
APOBP04114 AL513478.4-201ENST00000641636 310 ntBASIC2.16□□□□□ -2.06
APOBP04114 OR5AC4P-202ENST00000642086 985 ntBASIC2.16□□□□□ -2.06
APOBP04114 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
APOBP04114 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC2.16□□□□□ -2.06
APOBP04114 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC2.16□□□□□ -2.06
APOBP04114 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
APOBP04114 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
APOBP04114 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
APOBP04114 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.16□□□□□ -2.06
APOBP04114 AL133457.1-201ENST00000564251 987 ntBASIC2.16□□□□□ -2.06
APOBP04114 LARP7P3-201ENST00000579888 337 ntBASIC2.16□□□□□ -2.06
APOBP04114 MIR4769-201ENST00000584126 77 ntBASIC2.16□□□□□ -2.06
APOBP04114 AC007390.2-201ENST00000606229 3803 ntBASIC2.16□□□□□ -2.06
APOBP04114 BNIP3P41-202ENST00000616656 861 ntBASIC2.16□□□□□ -2.06
APOBP04114 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
APOBP04114 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC2.16□□□□□ -2.06
APOBP04114 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC2.16□□□□□ -2.06
APOBP04114 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
APOBP04114 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC2.16□□□□□ -2.06
APOBP04114 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC2.16□□□□□ -2.06
APOBP04114 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC2.16□□□□□ -2.06
APOBP04114 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
APOBP04114 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
APOBP04114 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
APOBP04114 RNU1-15P-201ENST00000353977 144 ntBASIC2.16□□□□□ -2.06
APOBP04114 RNA5SP52-201ENST00000362448 134 ntBASIC2.16□□□□□ -2.06
APOBP04114 AC234772.1-201ENST00000377927 937 ntBASIC2.16□□□□□ -2.06
APOBP04114 RPS4XP8-201ENST00000402039 771 ntBASIC2.16□□□□□ -2.06
APOBP04114 NACAP7-201ENST00000407371 609 ntBASIC2.16□□□□□ -2.06
APOBP04114 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC2.16□□□□□ -2.06
APOBP04114 RPL21P112-201ENST00000434403 463 ntBASIC2.16□□□□□ -2.06
APOBP04114 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC2.16□□□□□ -2.06
APOBP04114 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC2.16□□□□□ -2.06
APOBP04114 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC2.16□□□□□ -2.06
APOBP04114 STMN1P2-201ENST00000508435 439 ntBASIC2.16□□□□□ -2.06
APOBP04114 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.16□□□□□ -2.06
APOBP04114 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC2.16□□□□□ -2.06
APOBP04114 AL096803.3-201ENST00000609032 532 ntBASIC2.16□□□□□ -2.06
APOBP04114 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
APOBP04114 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
APOBP04114 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
APOBP04114 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC2.16□□□□□ -2.06
APOBP04114 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
APOBP04114 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
APOBP04114 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC2.15□□□□□ -2.06
APOBP04114 MIR1261-201ENST00000408659 82 ntBASIC2.15□□□□□ -2.06
APOBP04114 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
APOBP04114 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.15□□□□□ -2.06
APOBP04114 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.15□□□□□ -2.06
APOBP04114 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC2.15□□□□□ -2.06
APOBP04114 AC011270.1-201ENST00000558606 583 ntBASIC2.15□□□□□ -2.06
APOBP04114 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC2.15□□□□□ -2.06
APOBP04114 OR2AS2P-201ENST00000606902 342 ntBASIC2.15□□□□□ -2.06
APOBP04114 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
APOBP04114 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
APOBP04114 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.15□□□□□ -2.06
APOBP04114 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
APOBP04114 EIF4EP1-201ENST00000422311 642 ntBASIC2.15□□□□□ -2.07
APOBP04114 SETP9-201ENST00000423837 832 ntBASIC2.15□□□□□ -2.07
APOBP04114 AC006028.1-201ENST00000438379 402 ntBASIC2.15□□□□□ -2.07
APOBP04114 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.15□□□□□ -2.07
APOBP04114 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.15□□□□□ -2.07
APOBP04114 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC2.15□□□□□ -2.07
APOBP04114 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC2.15□□□□□ -2.07
APOBP04114 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC2.15□□□□□ -2.07
APOBP04114 AL137790.1-201ENST00000634283 177 ntBASIC2.15□□□□□ -2.07
APOBP04114 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
APOBP04114 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
APOBP04114 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
APOBP04114 AC108206.1-201ENST00000570186 4159 ntBASIC2.15□□□□□ -2.07
APOBP04114 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
APOBP04114 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
APOBP04114 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms