Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC6.06□□□□□ -1.44
PDGFAP04085 NLRP3P1-201ENST00000622303 1785 ntBASIC6.06□□□□□ -1.44
PDGFAP04085 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFAP04085 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
PDGFAP04085 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
PDGFAP04085 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.06□□□□□ -1.44
PDGFAP04085 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PDGFAP04085 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFAP04085 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFAP04085 RNA5SP258-201ENST00000362750 119 ntBASIC6.06□□□□□ -1.44
PDGFAP04085 Y_RNA.184-201ENST00000363884 108 ntBASIC6.06□□□□□ -1.44
PDGFAP04085 RNU4-48P-201ENST00000365559 182 ntBASIC6.06□□□□□ -1.44
PDGFAP04085 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFAP04085 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PDGFAP04085 RNU6-1226P-201ENST00000384317 107 ntBASIC6.06□□□□□ -1.44
PDGFAP04085 SSXP10-201ENST00000402595 565 ntBASIC6.06□□□□□ -1.44
PDGFAP04085 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.06□□□□□ -1.44
PDGFAP04085 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFAP04085 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.06□□□□□ -1.44
PDGFAP04085 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFAP04085 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC6.06□□□□□ -1.44
PDGFAP04085 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.06□□□□□ -1.44
PDGFAP04085 AC024082.2-201ENST00000434771 238 ntBASIC6.06□□□□□ -1.44
PDGFAP04085 RPS20P5-201ENST00000434808 360 ntBASIC6.06□□□□□ -1.44
PDGFAP04085 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.06□□□□□ -1.44
PDGFAP04085 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.06□□□□□ -1.44
PDGFAP04085 HMGN2P26-201ENST00000463169 339 ntBASIC6.06□□□□□ -1.44
PDGFAP04085 GMFBP1-201ENST00000467831 427 ntBASIC6.06□□□□□ -1.44
PDGFAP04085 AC006512.1-201ENST00000468816 291 ntBASIC6.06□□□□□ -1.44
PDGFAP04085 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC6.06□□□□□ -1.44
PDGFAP04085 HSPD1P15-201ENST00000505573 1122 ntBASIC6.06□□□□□ -1.44
PDGFAP04085 AC011411.1-201ENST00000509592 876 ntBASIC6.06□□□□□ -1.44
PDGFAP04085 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC6.06□□□□□ -1.44
PDGFAP04085 AC021146.1-201ENST00000511202 716 ntBASIC6.06□□□□□ -1.44
PDGFAP04085 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC6.06□□□□□ -1.44
PDGFAP04085 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.06□□□□□ -1.44
PDGFAP04085 AP005597.4-201ENST00000526762 229 ntBASIC6.06□□□□□ -1.44
PDGFAP04085 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.06□□□□□ -1.44
PDGFAP04085 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC6.06□□□□□ -1.44
PDGFAP04085 AC018552.3-201ENST00000567416 561 ntBASIC6.06□□□□□ -1.44
PDGFAP04085 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFAP04085 AC010463.3-201ENST00000594077 500 ntBASIC6.06□□□□□ -1.44
PDGFAP04085 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC6.06□□□□□ -1.44
PDGFAP04085 AC111186.1-201ENST00000604684 130 ntBASIC6.06□□□□□ -1.44
PDGFAP04085 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.06□□□□□ -1.44
PDGFAP04085 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC6.06□□□□□ -1.44
PDGFAP04085 AL596245.1-201ENST00000618994 362 ntBASIC6.06□□□□□ -1.44
PDGFAP04085 AC034229.6-201ENST00000623704 224 ntBASIC6.06□□□□□ -1.44
PDGFAP04085 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.06□□□□□ -1.44
PDGFAP04085 ATM-228ENST00000639240 498 ntTSL 5 BASIC6.06□□□□□ -1.44
PDGFAP04085 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
PDGFAP04085 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.06□□□□□ -1.44
PDGFAP04085 HSPD1P8-201ENST00000400121 1658 ntBASIC6.06□□□□□ -1.44
PDGFAP04085 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
PDGFAP04085 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.06□□□□□ -1.44
PDGFAP04085 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.06□□□□□ -1.44
PDGFAP04085 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.06□□□□□ -1.44
PDGFAP04085 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFAP04085 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFAP04085 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFAP04085 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFAP04085 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFAP04085 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
PDGFAP04085 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFAP04085 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFAP04085 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFAP04085 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.06□□□□□ -1.44
PDGFAP04085 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFAP04085 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PDGFAP04085 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.05□□□□□ -1.44
PDGFAP04085 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.05□□□□□ -1.44
PDGFAP04085 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFAP04085 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.05□□□□□ -1.44
PDGFAP04085 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.05□□□□□ -1.44
PDGFAP04085 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC6.05□□□□□ -1.44
PDGFAP04085 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFAP04085 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFAP04085 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFAP04085 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFAP04085 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFAP04085 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.05□□□□□ -1.44
PDGFAP04085 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.05□□□□□ -1.44
PDGFAP04085 AL118496.1-201ENST00000440201 1812 ntBASIC6.05□□□□□ -1.44
PDGFAP04085 RPL12P13-201ENST00000310055 497 ntBASIC6.05□□□□□ -1.44
PDGFAP04085 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFAP04085 SNORA70H-201ENST00000383910 135 ntBASIC6.05□□□□□ -1.44
PDGFAP04085 Y_RNA.387-201ENST00000383918 102 ntBASIC6.05□□□□□ -1.44
PDGFAP04085 SNORA70J-201ENST00000384182 135 ntBASIC6.05□□□□□ -1.44
PDGFAP04085 AC004386.1-201ENST00000393214 761 ntBASIC6.05□□□□□ -1.44
PDGFAP04085 RNU6-1148P-201ENST00000410992 104 ntBASIC6.05□□□□□ -1.44
PDGFAP04085 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC6.05□□□□□ -1.44
PDGFAP04085 RPS7P15-201ENST00000415804 584 ntBASIC6.05□□□□□ -1.44
PDGFAP04085 AL929472.1-201ENST00000417484 429 ntBASIC6.05□□□□□ -1.44
PDGFAP04085 AC092832.1-201ENST00000422934 400 ntBASIC6.05□□□□□ -1.44
PDGFAP04085 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.05□□□□□ -1.44
PDGFAP04085 AC239367.3-201ENST00000428996 814 ntBASIC6.05□□□□□ -1.44
PDGFAP04085 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.05□□□□□ -1.44
PDGFAP04085 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC6.05□□□□□ -1.44
PDGFAP04085 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.05□□□□□ -1.44
PDGFAP04085 AC012075.1-201ENST00000436549 580 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms