Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL1A1P02452 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL1A1P02452 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
COL1A1P02452 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL1A1P02452 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.35□□□□□ -1.71
COL1A1P02452 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL1A1P02452 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
COL1A1P02452 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL1A1P02452 ZNF833P-201ENST00000424938 1494 ntBASIC4.35□□□□□ -1.71
COL1A1P02452 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL1A1P02452 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL1A1P02452 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.35□□□□□ -1.71
COL1A1P02452 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
COL1A1P02452 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.35□□□□□ -1.71
COL1A1P02452 RNA5SP120-201ENST00000410900 112 ntBASIC4.35□□□□□ -1.71
COL1A1P02452 MTND2P11-201ENST00000423638 648 ntBASIC4.35□□□□□ -1.71
COL1A1P02452 MOB1AP1-201ENST00000430903 535 ntBASIC4.35□□□□□ -1.71
COL1A1P02452 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.35□□□□□ -1.71
COL1A1P02452 AC025518.1-201ENST00000479856 347 ntBASIC4.35□□□□□ -1.71
COL1A1P02452 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.35□□□□□ -1.71
COL1A1P02452 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL1A1P02452 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.35□□□□□ -1.71
COL1A1P02452 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.35□□□□□ -1.71
COL1A1P02452 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.35□□□□□ -1.71
COL1A1P02452 AC012493.2-201ENST00000595083 291 ntBASIC4.35□□□□□ -1.71
COL1A1P02452 AC069209.1-201ENST00000619282 651 ntBASIC4.35□□□□□ -1.71
COL1A1P02452 AC007656.2-201ENST00000624902 4547 ntBASIC4.35□□□□□ -1.71
COL1A1P02452 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
COL1A1P02452 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.34□□□□□ -1.71
COL1A1P02452 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
COL1A1P02452 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL1A1P02452 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL1A1P02452 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL1A1P02452 SNORD17-201ENST00000390930 237 ntBASIC4.34□□□□□ -1.71
COL1A1P02452 RN7SKP53-201ENST00000411337 315 ntBASIC4.34□□□□□ -1.71
COL1A1P02452 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.34□□□□□ -1.71
COL1A1P02452 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.34□□□□□ -1.71
COL1A1P02452 AC092809.1-201ENST00000441469 474 ntBASIC4.34□□□□□ -1.71
COL1A1P02452 RPS15AP29-201ENST00000445539 400 ntBASIC4.34□□□□□ -1.71
COL1A1P02452 AL591363.1-201ENST00000450091 483 ntBASIC4.34□□□□□ -1.71
COL1A1P02452 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.34□□□□□ -1.71
COL1A1P02452 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.34□□□□□ -1.71
COL1A1P02452 AGGF1P3-201ENST00000493675 1213 ntBASIC4.34□□□□□ -1.71
COL1A1P02452 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.34□□□□□ -1.71
COL1A1P02452 BTF3L4P4-201ENST00000506381 449 ntBASIC4.34□□□□□ -1.71
COL1A1P02452 RNU2-27P-201ENST00000516185 142 ntBASIC4.34□□□□□ -1.71
COL1A1P02452 AL360157.1-201ENST00000565962 87 ntBASIC4.34□□□□□ -1.71
COL1A1P02452 AC006077.1-201ENST00000604746 343 ntBASIC4.34□□□□□ -1.71
COL1A1P02452 MIR8057-201ENST00000620957 69 ntBASIC4.34□□□□□ -1.71
COL1A1P02452 U4.6-201ENST00000621618 127 ntBASIC4.34□□□□□ -1.71
COL1A1P02452 MIR4727-201ENST00000622232 55 ntBASIC4.34□□□□□ -1.71
COL1A1P02452 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.34□□□□□ -1.71
COL1A1P02452 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL1A1P02452 AC090337.1-201ENST00000579651 2074 ntBASIC4.33□□□□□ -1.72
COL1A1P02452 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.33□□□□□ -1.72
COL1A1P02452 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
COL1A1P02452 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL1A1P02452 AC007685.1-201ENST00000329806 452 ntBASIC4.33□□□□□ -1.72
COL1A1P02452 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL1A1P02452 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL1A1P02452 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COL1A1P02452 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.33□□□□□ -1.72
COL1A1P02452 HSFY4P-201ENST00000415994 1181 ntBASIC4.33□□□□□ -1.72
COL1A1P02452 RPL21P109-201ENST00000422213 475 ntBASIC4.33□□□□□ -1.72
COL1A1P02452 USP12PY-201ENST00000427677 1064 ntBASIC4.33□□□□□ -1.72
COL1A1P02452 AC017083.1-201ENST00000428093 483 ntBASIC4.33□□□□□ -1.72
COL1A1P02452 AC005300.1-201ENST00000428401 373 ntBASIC4.33□□□□□ -1.72
COL1A1P02452 AP000942.1-201ENST00000463969 747 ntBASIC4.33□□□□□ -1.72
COL1A1P02452 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.33□□□□□ -1.72
COL1A1P02452 ASNSP4-201ENST00000511103 447 ntBASIC4.33□□□□□ -1.72
COL1A1P02452 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.33□□□□□ -1.72
COL1A1P02452 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.33□□□□□ -1.72
COL1A1P02452 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.33□□□□□ -1.72
COL1A1P02452 AC006116.10-201ENST00000591836 581 ntBASIC4.33□□□□□ -1.72
COL1A1P02452 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.33□□□□□ -1.72
COL1A1P02452 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.33□□□□□ -1.72
COL1A1P02452 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
COL1A1P02452 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.33□□□□□ -1.72
COL1A1P02452 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
COL1A1P02452 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
COL1A1P02452 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
COL1A1P02452 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
COL1A1P02452 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COL1A1P02452 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
COL1A1P02452 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
COL1A1P02452 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
COL1A1P02452 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
COL1A1P02452 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
COL1A1P02452 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
COL1A1P02452 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.32□□□□□ -1.72
COL1A1P02452 AJ239321.1-201ENST00000424255 564 ntBASIC4.32□□□□□ -1.72
COL1A1P02452 OR6C71P-201ENST00000432580 913 ntBASIC4.32□□□□□ -1.72
COL1A1P02452 RPL26P28-201ENST00000451325 435 ntBASIC4.32□□□□□ -1.72
COL1A1P02452 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.32□□□□□ -1.72
COL1A1P02452 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.32□□□□□ -1.72
COL1A1P02452 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.32□□□□□ -1.72
COL1A1P02452 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.32□□□□□ -1.72
COL1A1P02452 AL133457.1-201ENST00000564251 987 ntBASIC4.32□□□□□ -1.72
COL1A1P02452 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.32□□□□□ -1.72
COL1A1P02452 AL163642.2-201ENST00000604722 1019 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms