Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.33□□□□□ -1.72
PDGFBP01127 AC025918.2-201ENST00000558683 763 ntBASIC4.33□□□□□ -1.72
PDGFBP01127 CYCSP40-201ENST00000575927 294 ntBASIC4.33□□□□□ -1.72
PDGFBP01127 AC067852.4-201ENST00000590314 478 ntBASIC4.33□□□□□ -1.72
PDGFBP01127 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.33□□□□□ -1.72
PDGFBP01127 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.33□□□□□ -1.72
PDGFBP01127 AC090181.2-201ENST00000602975 672 ntBASIC4.33□□□□□ -1.72
PDGFBP01127 AC092574.1-201ENST00000609771 420 ntBASIC4.33□□□□□ -1.72
PDGFBP01127 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PDGFBP01127 AL034408.1-202ENST00000636088 415 ntBASIC4.33□□□□□ -1.72
PDGFBP01127 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.33□□□□□ -1.72
PDGFBP01127 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
PDGFBP01127 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDGFBP01127 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
PDGFBP01127 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDGFBP01127 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDGFBP01127 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDGFBP01127 CASC19-261ENST00000641853 1638 ntBASIC4.32□□□□□ -1.72
PDGFBP01127 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.32□□□□□ -1.72
PDGFBP01127 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
PDGFBP01127 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.32□□□□□ -1.72
PDGFBP01127 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDGFBP01127 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDGFBP01127 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDGFBP01127 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.32□□□□□ -1.72
PDGFBP01127 PTMAP5-201ENST00000393073 333 ntBASIC4.32□□□□□ -1.72
PDGFBP01127 AC004022.2-201ENST00000413824 193 ntBASIC4.32□□□□□ -1.72
PDGFBP01127 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.32□□□□□ -1.72
PDGFBP01127 HSFY1P1-201ENST00000423928 1178 ntBASIC4.32□□□□□ -1.72
PDGFBP01127 RPL21P43-201ENST00000425440 472 ntBASIC4.32□□□□□ -1.72
PDGFBP01127 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.32□□□□□ -1.72
PDGFBP01127 AC069540.1-201ENST00000446320 988 ntBASIC4.32□□□□□ -1.72
PDGFBP01127 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.32□□□□□ -1.72
PDGFBP01127 MTND2P6-201ENST00000455337 1030 ntBASIC4.32□□□□□ -1.72
PDGFBP01127 AC007967.1-201ENST00000455422 1159 ntBASIC4.32□□□□□ -1.72
PDGFBP01127 RPL7P9-201ENST00000468715 747 ntBASIC4.32□□□□□ -1.72
PDGFBP01127 NPM1P17-201ENST00000479221 602 ntBASIC4.32□□□□□ -1.72
PDGFBP01127 AF213884.1-201ENST00000488102 463 ntBASIC4.32□□□□□ -1.72
PDGFBP01127 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.32□□□□□ -1.72
PDGFBP01127 RN7SL812P-201ENST00000493791 279 ntBASIC4.32□□□□□ -1.72
PDGFBP01127 AL592156.1-201ENST00000508758 304 ntBASIC4.32□□□□□ -1.72
PDGFBP01127 OR5H4P-201ENST00000510851 923 ntBASIC4.32□□□□□ -1.72
PDGFBP01127 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.32□□□□□ -1.72
PDGFBP01127 RNA5SP360-201ENST00000516555 118 ntBASIC4.32□□□□□ -1.72
PDGFBP01127 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.32□□□□□ -1.72
PDGFBP01127 HMGB1P19-201ENST00000517578 577 ntBASIC4.32□□□□□ -1.72
PDGFBP01127 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.32□□□□□ -1.72
PDGFBP01127 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.32□□□□□ -1.72
PDGFBP01127 CIR1P1-201ENST00000524055 1133 ntBASIC4.32□□□□□ -1.72
PDGFBP01127 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.32□□□□□ -1.72
PDGFBP01127 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.32□□□□□ -1.72
PDGFBP01127 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.32□□□□□ -1.72
PDGFBP01127 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.32□□□□□ -1.72
PDGFBP01127 AC006349.1-201ENST00000555526 235 ntBASIC4.32□□□□□ -1.72
PDGFBP01127 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.32□□□□□ -1.72
PDGFBP01127 AC090751.1-201ENST00000566966 267 ntBASIC4.32□□□□□ -1.72
PDGFBP01127 ZNF415P1-201ENST00000582279 1166 ntBASIC4.32□□□□□ -1.72
PDGFBP01127 AC010680.3-201ENST00000604215 520 ntBASIC4.32□□□□□ -1.72
PDGFBP01127 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.32□□□□□ -1.72
PDGFBP01127 AL442067.2-201ENST00000614033 363 ntBASIC4.32□□□□□ -1.72
PDGFBP01127 MIR1264-201ENST00000616374 69 ntBASIC4.32□□□□□ -1.72
PDGFBP01127 AL138721.1-201ENST00000616756 179 ntBASIC4.32□□□□□ -1.72
PDGFBP01127 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDGFBP01127 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDGFBP01127 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.32□□□□□ -1.72
PDGFBP01127 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.32□□□□□ -1.72
PDGFBP01127 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PDGFBP01127 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PDGFBP01127 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PDGFBP01127 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.31□□□□□ -1.72
PDGFBP01127 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDGFBP01127 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PDGFBP01127 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.31□□□□□ -1.72
PDGFBP01127 HNRNPDP2-201ENST00000406475 478 ntBASIC4.31□□□□□ -1.72
PDGFBP01127 RNU2-65P-201ENST00000410162 185 ntBASIC4.31□□□□□ -1.72
PDGFBP01127 TPT1P2-201ENST00000413105 503 ntBASIC4.31□□□□□ -1.72
PDGFBP01127 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.31□□□□□ -1.72
PDGFBP01127 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.31□□□□□ -1.72
PDGFBP01127 ARL2BPP3-201ENST00000421226 480 ntBASIC4.31□□□□□ -1.72
PDGFBP01127 EIF4HP2-201ENST00000424380 563 ntBASIC4.31□□□□□ -1.72
PDGFBP01127 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4.31□□□□□ -1.72
PDGFBP01127 RPS27P5-201ENST00000444247 244 ntBASIC4.31□□□□□ -1.72
PDGFBP01127 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PDGFBP01127 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.31□□□□□ -1.72
PDGFBP01127 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.31□□□□□ -1.72
PDGFBP01127 AC090686.1-201ENST00000481577 749 ntBASIC4.31□□□□□ -1.72
PDGFBP01127 GMPSP1-201ENST00000514075 579 ntBASIC4.31□□□□□ -1.72
PDGFBP01127 MTND1P36-201ENST00000522384 936 ntBASIC4.31□□□□□ -1.72
PDGFBP01127 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PDGFBP01127 AC106782.4-201ENST00000568264 210 ntBASIC4.31□□□□□ -1.72
PDGFBP01127 AC005255.1-201ENST00000593748 216 ntBASIC4.31□□□□□ -1.72
PDGFBP01127 AL392112.1-201ENST00000605115 829 ntBASIC4.31□□□□□ -1.72
PDGFBP01127 AC005972.3-201ENST00000606304 481 ntBASIC4.31□□□□□ -1.72
PDGFBP01127 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PDGFBP01127 AP001002.2-201ENST00000625137 386 ntBASIC4.31□□□□□ -1.72
PDGFBP01127 AC083865.1-201ENST00000636634 831 ntBASIC4.31□□□□□ -1.72
PDGFBP01127 AC009452.1-201ENST00000640823 606 ntBASIC4.31□□□□□ -1.72
PDGFBP01127 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDGFBP01127 MAPK10-320ENST00000641462 6696 ntBASIC4.31□□□□□ -1.72
PDGFBP01127 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms