Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC091042.1-201ENST00000579213 173 ntBASIC4.33□□□□□ -1.72
NKX2-2O95096 MIR4436B2-201ENST00000581415 91 ntBASIC4.33□□□□□ -1.72
NKX2-2O95096 MIR4436B1-201ENST00000583272 91 ntBASIC4.33□□□□□ -1.72
NKX2-2O95096 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.33□□□□□ -1.72
NKX2-2O95096 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.33□□□□□ -1.72
NKX2-2O95096 AC006272.2-201ENST00000594725 163 ntBASIC4.33□□□□□ -1.72
NKX2-2O95096 AC245036.5-201ENST00000596330 847 ntBASIC4.33□□□□□ -1.72
NKX2-2O95096 MRPS35P3-201ENST00000603189 709 ntBASIC4.33□□□□□ -1.72
NKX2-2O95096 MIR6853-201ENST00000619642 74 ntBASIC4.33□□□□□ -1.72
NKX2-2O95096 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.33□□□□□ -1.72
NKX2-2O95096 AC068620.4-201ENST00000636730 1182 ntBASIC4.33□□□□□ -1.72
NKX2-2O95096 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NKX2-2O95096 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.33□□□□□ -1.72
NKX2-2O95096 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.33□□□□□ -1.72
NKX2-2O95096 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.33□□□□□ -1.72
NKX2-2O95096 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NKX2-2O95096 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.32□□□□□ -1.72
NKX2-2O95096 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NKX2-2O95096 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
NKX2-2O95096 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.32□□□□□ -1.72
NKX2-2O95096 AC093591.2-201ENST00000565254 3843 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NKX2-2O95096 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NKX2-2O95096 AC104118.1-201ENST00000607625 1589 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 MAPK10-320ENST00000641462 6696 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NKX2-2O95096 AL592437.2-201ENST00000421655 2434 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.32□□□□□ -1.72
NKX2-2O95096 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NKX2-2O95096 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NKX2-2O95096 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NKX2-2O95096 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NKX2-2O95096 AC109315.1-201ENST00000584143 1347 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 Y_RNA.192-201ENST00000363977 102 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NKX2-2O95096 Y_RNA.465-201ENST00000384293 102 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 MIR921-201ENST00000401133 56 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 RNA5SP80-201ENST00000410475 111 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 NRBF2P2-201ENST00000413087 861 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 AL161449.1-201ENST00000414531 1199 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.32□□□□□ -1.72
NKX2-2O95096 NUP35P2-201ENST00000416748 943 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.32□□□□□ -1.72
NKX2-2O95096 AC092634.6-201ENST00000418558 192 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 AL590762.4-201ENST00000425885 253 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 AC234779.1-201ENST00000425910 285 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.32□□□□□ -1.72
NKX2-2O95096 USP9YP11-201ENST00000427537 717 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 AC008072.1-201ENST00000434254 824 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.32□□□□□ -1.72
NKX2-2O95096 MTCO2P25-201ENST00000447065 681 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.32□□□□□ -1.72
NKX2-2O95096 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NKX2-2O95096 snoU13.7-201ENST00000459220 104 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 AC092324.1-201ENST00000468671 324 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 RN7SL826P-201ENST00000479724 288 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.32□□□□□ -1.72
NKX2-2O95096 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.32□□□□□ -1.72
NKX2-2O95096 OR5H4P-201ENST00000510851 923 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.32□□□□□ -1.72
NKX2-2O95096 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.32□□□□□ -1.72
NKX2-2O95096 RNU6-513P-201ENST00000516104 104 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.32□□□□□ -1.72
NKX2-2O95096 OR5D15P-201ENST00000531671 942 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.32□□□□□ -1.72
NKX2-2O95096 NBEAP1-201ENST00000554452 979 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.32□□□□□ -1.72
NKX2-2O95096 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.32□□□□□ -1.72
NKX2-2O95096 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.32□□□□□ -1.72
NKX2-2O95096 Z99289.3-201ENST00000605586 594 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 AL021707.7-201ENST00000607991 416 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.32□□□□□ -1.72
NKX2-2O95096 AC009464.1-201ENST00000615731 469 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 AC073348.1-201ENST00000623002 331 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 AP002791.1-201ENST00000623291 381 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 AF001550.2-201ENST00000636643 217 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 MKKS-204ENST00000639674 192 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 DDX18P3-201ENST00000404856 2007 ntBASIC4.32□□□□□ -1.72
NKX2-2O95096 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NKX2-2O95096 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NKX2-2O95096 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
NKX2-2O95096 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.31□□□□□ -1.72
NKX2-2O95096 AC011978.2-201ENST00000569835 2054 ntBASIC4.31□□□□□ -1.72
NKX2-2O95096 AC135352.1-201ENST00000506173 1418 ntBASIC4.31□□□□□ -1.72
NKX2-2O95096 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
NKX2-2O95096 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-2O95096 AC125257.1-201ENST00000560400 2930 ntBASIC4.31□□□□□ -1.72
NKX2-2O95096 RNU6-492P-201ENST00000363035 104 ntBASIC4.31□□□□□ -1.72
NKX2-2O95096 RN7SKP115-201ENST00000363177 317 ntBASIC4.31□□□□□ -1.72
NKX2-2O95096 BMS1P3-201ENST00000372011 932 ntBASIC4.31□□□□□ -1.72
NKX2-2O95096 RNU6-83P-201ENST00000384568 112 ntBASIC4.31□□□□□ -1.72
NKX2-2O95096 TAS2R15P-201ENST00000390674 928 ntBASIC4.31□□□□□ -1.72
NKX2-2O95096 MIR550A3-201ENST00000390735 95 ntBASIC4.31□□□□□ -1.72
NKX2-2O95096 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.31□□□□□ -1.72
NKX2-2O95096 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.31□□□□□ -1.72
NKX2-2O95096 AL136133.1-201ENST00000413694 376 ntBASIC4.31□□□□□ -1.72
NKX2-2O95096 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.31□□□□□ -1.72
NKX2-2O95096 RPS3AP9-201ENST00000417027 792 ntBASIC4.31□□□□□ -1.72
NKX2-2O95096 RBMY2KP-201ENST00000418221 992 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms