Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.56□□□□□ -1.68
LDB2O43679 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
LDB2O43679 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LDB2O43679 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.55□□□□□ -1.68
LDB2O43679 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LDB2O43679 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
LDB2O43679 CPHL1P-201ENST00000461341 3407 ntBASIC4.55□□□□□ -1.68
LDB2O43679 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.55□□□□□ -1.68
LDB2O43679 AC021242.1-201ENST00000507315 2035 ntBASIC4.55□□□□□ -1.68
LDB2O43679 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LDB2O43679 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LDB2O43679 snoZ40.1-201ENST00000364540 72 ntBASIC4.55□□□□□ -1.68
LDB2O43679 MIR195-201ENST00000385194 87 ntBASIC4.55□□□□□ -1.68
LDB2O43679 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.55□□□□□ -1.68
LDB2O43679 SDHCP2-201ENST00000398565 501 ntBASIC4.55□□□□□ -1.68
LDB2O43679 SKINT1L-201ENST00000401057 817 ntBASIC4.55□□□□□ -1.68
LDB2O43679 VDAC1P9-201ENST00000412766 841 ntBASIC4.55□□□□□ -1.68
LDB2O43679 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.55□□□□□ -1.68
LDB2O43679 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.55□□□□□ -1.68
LDB2O43679 AC090960.1-201ENST00000421072 306 ntBASIC4.55□□□□□ -1.68
LDB2O43679 CNOT7P1-201ENST00000429006 852 ntBASIC4.55□□□□□ -1.68
LDB2O43679 AC068287.1-201ENST00000430283 295 ntBASIC4.55□□□□□ -1.68
LDB2O43679 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.55□□□□□ -1.68
LDB2O43679 UBE2V1P1-201ENST00000430836 445 ntBASIC4.55□□□□□ -1.68
LDB2O43679 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.55□□□□□ -1.68
LDB2O43679 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.55□□□□□ -1.68
LDB2O43679 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.55□□□□□ -1.68
LDB2O43679 HMGB1P45-201ENST00000435986 653 ntBASIC4.55□□□□□ -1.68
LDB2O43679 COX7BP2-201ENST00000437976 242 ntBASIC4.55□□□□□ -1.68
LDB2O43679 RPS26P30-201ENST00000443431 335 ntBASIC4.55□□□□□ -1.68
LDB2O43679 AL589765.3-201ENST00000446084 462 ntBASIC4.55□□□□□ -1.68
LDB2O43679 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.55□□□□□ -1.68
LDB2O43679 DNAJC19P8-201ENST00000452887 259 ntBASIC4.55□□□□□ -1.68
LDB2O43679 AL513533.1-201ENST00000453728 415 ntBASIC4.55□□□□□ -1.68
LDB2O43679 NECAP1P2-201ENST00000455668 727 ntBASIC4.55□□□□□ -1.68
LDB2O43679 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.55□□□□□ -1.68
LDB2O43679 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
LDB2O43679 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.55□□□□□ -1.68
LDB2O43679 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.55□□□□□ -1.68
LDB2O43679 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.55□□□□□ -1.68
LDB2O43679 RFPL4AP5-201ENST00000514977 504 ntBASIC4.55□□□□□ -1.68
LDB2O43679 FABP5P12-201ENST00000515543 389 ntBASIC4.55□□□□□ -1.68
LDB2O43679 RNU6-1129P-201ENST00000515964 104 ntBASIC4.55□□□□□ -1.68
LDB2O43679 RNA5SP464-201ENST00000516251 108 ntBASIC4.55□□□□□ -1.68
LDB2O43679 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.55□□□□□ -1.68
LDB2O43679 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.55□□□□□ -1.68
LDB2O43679 AL356057.1-201ENST00000533798 831 ntBASIC4.55□□□□□ -1.68
LDB2O43679 CYCSP28-201ENST00000534284 321 ntBASIC4.55□□□□□ -1.68
LDB2O43679 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.55□□□□□ -1.68
LDB2O43679 AC044913.1-201ENST00000557200 430 ntBASIC4.55□□□□□ -1.68
LDB2O43679 SULT1C2P2-201ENST00000562517 294 ntBASIC4.55□□□□□ -1.68
LDB2O43679 ATP5J2P6-201ENST00000565203 266 ntBASIC4.55□□□□□ -1.68
LDB2O43679 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.55□□□□□ -1.68
LDB2O43679 AC022884.3-201ENST00000579571 248 ntBASIC4.55□□□□□ -1.68
LDB2O43679 PIGPP4-201ENST00000584447 307 ntBASIC4.55□□□□□ -1.68
LDB2O43679 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.55□□□□□ -1.68
LDB2O43679 BPIFA4P-203ENST00000603168 689 ntBASIC4.55□□□□□ -1.68
LDB2O43679 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.55□□□□□ -1.68
LDB2O43679 AP002360.3-201ENST00000607673 710 ntBASIC4.55□□□□□ -1.68
LDB2O43679 MIR378J-201ENST00000611988 109 ntBASIC4.55□□□□□ -1.68
LDB2O43679 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.55□□□□□ -1.68
LDB2O43679 AC007490.1-201ENST00000624321 703 ntBASIC4.55□□□□□ -1.68
LDB2O43679 MIR7641-1-201ENST00000627518 61 ntBASIC4.55□□□□□ -1.68
LDB2O43679 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.55□□□□□ -1.68
LDB2O43679 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
LDB2O43679 AC087821.2-201ENST00000637086 450 ntBASIC4.55□□□□□ -1.68
LDB2O43679 MFSD8-245ENST00000641743 948 ntBASIC4.55□□□□□ -1.68
LDB2O43679 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LDB2O43679 LINC00622-201ENST00000562811 1570 ntBASIC4.55□□□□□ -1.68
LDB2O43679 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.55□□□□□ -1.68
LDB2O43679 CASC19-204ENST00000641001 2055 ntBASIC4.55□□□□□ -1.68
LDB2O43679 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LDB2O43679 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
LDB2O43679 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LDB2O43679 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LDB2O43679 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LDB2O43679 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.54□□□□□ -1.68
LDB2O43679 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LDB2O43679 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.54□□□□□ -1.68
LDB2O43679 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LDB2O43679 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
LDB2O43679 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
LDB2O43679 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LDB2O43679 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LDB2O43679 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.54□□□□□ -1.68
LDB2O43679 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
LDB2O43679 IGKV7-3-201ENST00000357453 298 ntBASIC4.54□□□□□ -1.68
LDB2O43679 SNORD113.2-201ENST00000364166 89 ntBASIC4.54□□□□□ -1.68
LDB2O43679 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
LDB2O43679 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LDB2O43679 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LDB2O43679 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
LDB2O43679 RNU5A-2P-201ENST00000384337 116 ntBASIC4.54□□□□□ -1.68
LDB2O43679 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.54□□□□□ -1.68
LDB2O43679 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.54□□□□□ -1.68
LDB2O43679 RAP1BP1-201ENST00000412709 553 ntBASIC4.54□□□□□ -1.68
LDB2O43679 MTND4P22-201ENST00000413116 1169 ntBASIC4.54□□□□□ -1.68
LDB2O43679 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.54□□□□□ -1.68
LDB2O43679 AC009480.2-201ENST00000422916 432 ntBASIC4.54□□□□□ -1.68
LDB2O43679 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms