Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
HOXA2O43364 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.11□□□□□ -1.27
HOXA2O43364 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.11□□□□□ -1.27
HOXA2O43364 TMC3-AS1-206ENST00000612811 2726 ntBASIC7.11□□□□□ -1.27
HOXA2O43364 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
HOXA2O43364 AL359922.2-201ENST00000581788 3017 ntBASIC7.11□□□□□ -1.27
HOXA2O43364 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HOXA2O43364 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HOXA2O43364 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HOXA2O43364 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.1□□□□□ -1.27
HOXA2O43364 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HOXA2O43364 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HOXA2O43364 AC121333.1-201ENST00000567488 2709 ntBASIC7.1□□□□□ -1.27
HOXA2O43364 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HOXA2O43364 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.1□□□□□ -1.27
HOXA2O43364 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.1□□□□□ -1.27
HOXA2O43364 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HOXA2O43364 Y_RNA.257-201ENST00000364596 102 ntBASIC7.1□□□□□ -1.27
HOXA2O43364 RN7SKP15-201ENST00000364742 309 ntBASIC7.1□□□□□ -1.27
HOXA2O43364 RNY3P13-201ENST00000365542 102 ntBASIC7.1□□□□□ -1.27
HOXA2O43364 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC7.1□□□□□ -1.27
HOXA2O43364 RNU6-601P-201ENST00000384540 107 ntBASIC7.1□□□□□ -1.27
HOXA2O43364 VDAC1P9-201ENST00000412766 841 ntBASIC7.1□□□□□ -1.27
HOXA2O43364 AL590609.2-201ENST00000421430 368 ntBASIC7.1□□□□□ -1.27
HOXA2O43364 NMD3P2-201ENST00000421815 761 ntBASIC7.1□□□□□ -1.27
HOXA2O43364 ATP5A1P8-201ENST00000423669 1291 ntBASIC7.1□□□□□ -1.27
HOXA2O43364 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC7.1□□□□□ -1.27
HOXA2O43364 MED13P1-201ENST00000428342 171 ntBASIC7.1□□□□□ -1.27
HOXA2O43364 AC007679.3-201ENST00000434035 414 ntBASIC7.1□□□□□ -1.27
HOXA2O43364 RPS24P13-201ENST00000442520 397 ntBASIC7.1□□□□□ -1.27
HOXA2O43364 AC144530.1-201ENST00000452862 555 ntBASIC7.1□□□□□ -1.27
HOXA2O43364 SNRPFP3-201ENST00000457792 225 ntBASIC7.1□□□□□ -1.27
HOXA2O43364 AC107222.1-201ENST00000510899 637 ntBASIC7.1□□□□□ -1.27
HOXA2O43364 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC7.1□□□□□ -1.27
HOXA2O43364 RNU6-1038P-201ENST00000516516 104 ntBASIC7.1□□□□□ -1.27
HOXA2O43364 RNU6-635P-201ENST00000516651 102 ntBASIC7.1□□□□□ -1.27
HOXA2O43364 CYCSP28-201ENST00000534284 321 ntBASIC7.1□□□□□ -1.27
HOXA2O43364 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.1□□□□□ -1.27
HOXA2O43364 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.1□□□□□ -1.27
HOXA2O43364 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC7.1□□□□□ -1.27
HOXA2O43364 MGST1-215ENST00000540056 546 ntTSL 3 BASIC7.1□□□□□ -1.27
HOXA2O43364 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC7.1□□□□□ -1.27
HOXA2O43364 SETP2-201ENST00000553886 926 ntBASIC7.1□□□□□ -1.27
HOXA2O43364 FXNP1-201ENST00000555153 337 ntBASIC7.1□□□□□ -1.27
HOXA2O43364 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HOXA2O43364 MIR4775-201ENST00000581168 75 ntBASIC7.1□□□□□ -1.27
HOXA2O43364 SNORA74.4-201ENST00000607595 199 ntBASIC7.1□□□□□ -1.27
HOXA2O43364 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.1□□□□□ -1.27
HOXA2O43364 MIR6085-201ENST00000618314 110 ntBASIC7.1□□□□□ -1.27
HOXA2O43364 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.1□□□□□ -1.27
HOXA2O43364 AL159972.1-201ENST00000625150 448 ntBASIC7.1□□□□□ -1.27
HOXA2O43364 AC073488.9-201ENST00000631601 754 ntBASIC7.1□□□□□ -1.27
HOXA2O43364 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC7.1□□□□□ -1.27
HOXA2O43364 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HOXA2O43364 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.1□□□□□ -1.27
HOXA2O43364 AC034229.2-201ENST00000566945 2508 ntBASIC7.1□□□□□ -1.27
HOXA2O43364 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
HOXA2O43364 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HOXA2O43364 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HOXA2O43364 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
HOXA2O43364 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC7.1□□□□□ -1.27
HOXA2O43364 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
HOXA2O43364 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
HOXA2O43364 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HOXA2O43364 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.1□□□□□ -1.27
HOXA2O43364 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.1□□□□□ -1.27
HOXA2O43364 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HOXA2O43364 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HOXA2O43364 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.09□□□□□ -1.27
HOXA2O43364 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.09□□□□□ -1.27
HOXA2O43364 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
HOXA2O43364 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
HOXA2O43364 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.09□□□□□ -1.27
HOXA2O43364 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HOXA2O43364 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HOXA2O43364 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC7.09□□□□□ -1.27
HOXA2O43364 SPATA31C1-201ENST00000420021 3895 ntBASIC7.09□□□□□ -1.27
HOXA2O43364 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.09□□□□□ -1.27
HOXA2O43364 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
HOXA2O43364 RPL12P13-201ENST00000310055 497 ntBASIC7.09□□□□□ -1.27
HOXA2O43364 RNU6-1252P-201ENST00000363054 104 ntBASIC7.09□□□□□ -1.27
HOXA2O43364 Y_RNA.378-201ENST00000365652 113 ntBASIC7.09□□□□□ -1.27
HOXA2O43364 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HOXA2O43364 RNU6-1207P-201ENST00000384343 107 ntBASIC7.09□□□□□ -1.27
HOXA2O43364 RNU6-441P-201ENST00000384545 106 ntBASIC7.09□□□□□ -1.27
HOXA2O43364 RNU6-310P-201ENST00000384655 107 ntBASIC7.09□□□□□ -1.27
HOXA2O43364 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
HOXA2O43364 RPL7AP14-201ENST00000424041 802 ntBASIC7.09□□□□□ -1.27
HOXA2O43364 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC7.09□□□□□ -1.27
HOXA2O43364 RPL37P1-201ENST00000432310 284 ntBASIC7.09□□□□□ -1.27
HOXA2O43364 MTATP6P16-201ENST00000434543 526 ntBASIC7.09□□□□□ -1.27
HOXA2O43364 AC005019.1-201ENST00000436455 431 ntBASIC7.09□□□□□ -1.27
HOXA2O43364 AL590399.4-201ENST00000436561 601 ntBASIC7.09□□□□□ -1.27
HOXA2O43364 AC108734.1-201ENST00000439549 399 ntBASIC7.09□□□□□ -1.27
HOXA2O43364 RPL5P7-201ENST00000444235 813 ntBASIC7.09□□□□□ -1.27
HOXA2O43364 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC7.09□□□□□ -1.27
HOXA2O43364 AL390728.3-201ENST00000452704 270 ntBASIC7.09□□□□□ -1.27
HOXA2O43364 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC7.09□□□□□ -1.27
HOXA2O43364 TRBV26-201ENST00000456572 344 ntBASIC7.09□□□□□ -1.27
HOXA2O43364 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms