Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 BNIP3P1-201ENST00000547295 580 ntBASIC5□□□□□ -1.61
PHGDHO43175 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5□□□□□ -1.61
PHGDHO43175 AC084824.1-201ENST00000550917 1005 ntBASIC5□□□□□ -1.61
PHGDHO43175 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5□□□□□ -1.61
PHGDHO43175 NDUFAF4P1-201ENST00000559425 519 ntBASIC5□□□□□ -1.61
PHGDHO43175 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5□□□□□ -1.61
PHGDHO43175 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5□□□□□ -1.61
PHGDHO43175 AGGF1P8-201ENST00000562979 1000 ntBASIC5□□□□□ -1.61
PHGDHO43175 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5□□□□□ -1.61
PHGDHO43175 MIR4504-201ENST00000577413 92 ntBASIC5□□□□□ -1.61
PHGDHO43175 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5□□□□□ -1.61
PHGDHO43175 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5□□□□□ -1.61
PHGDHO43175 AC006272.2-201ENST00000594725 163 ntBASIC5□□□□□ -1.61
PHGDHO43175 AC005191.1-201ENST00000603950 358 ntBASIC5□□□□□ -1.61
PHGDHO43175 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5□□□□□ -1.61
PHGDHO43175 RBM12B-AS1-201ENST00000623283 653 ntBASIC5□□□□□ -1.61
PHGDHO43175 AC091965.5-201ENST00000624785 342 ntBASIC5□□□□□ -1.61
PHGDHO43175 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5□□□□□ -1.61
PHGDHO43175 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5□□□□□ -1.61
PHGDHO43175 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5□□□□□ -1.61
PHGDHO43175 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5□□□□□ -1.61
PHGDHO43175 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5□□□□□ -1.61
PHGDHO43175 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
PHGDHO43175 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PHGDHO43175 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5□□□□□ -1.61
PHGDHO43175 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5□□□□□ -1.61
PHGDHO43175 AC005332.5-201ENST00000591222 2919 ntBASIC5□□□□□ -1.61
PHGDHO43175 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.99□□□□□ -1.61
PHGDHO43175 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PHGDHO43175 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PHGDHO43175 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.99□□□□□ -1.61
PHGDHO43175 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PHGDHO43175 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PHGDHO43175 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PHGDHO43175 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
PHGDHO43175 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PHGDHO43175 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PHGDHO43175 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PHGDHO43175 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PHGDHO43175 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
PHGDHO43175 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PHGDHO43175 UBBP2-201ENST00000376781 231 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PHGDHO43175 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.99□□□□□ -1.61
PHGDHO43175 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PHGDHO43175 SNORA77-201ENST00000408716 125 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 RN7SKP206-201ENST00000410823 293 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 AC004022.2-201ENST00000413824 193 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.99□□□□□ -1.61
PHGDHO43175 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.99□□□□□ -1.61
PHGDHO43175 OR2AH1P-201ENST00000425717 928 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 NIPA2P1-201ENST00000426223 976 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 VN1R108P-201ENST00000431580 830 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 AC098826.1-201ENST00000433943 471 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 AL450023.3-201ENST00000440592 271 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 AL391987.1-201ENST00000441025 200 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.99□□□□□ -1.61
PHGDHO43175 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PHGDHO43175 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.99□□□□□ -1.61
PHGDHO43175 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.99□□□□□ -1.61
PHGDHO43175 AC009961.3-201ENST00000449832 765 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.99□□□□□ -1.61
PHGDHO43175 AC092757.1-201ENST00000467293 467 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 AP000893.1-201ENST00000474462 794 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 HMGN2P25-201ENST00000486956 268 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 AC073073.1-201ENST00000493920 463 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 AC108078.3-201ENST00000502633 489 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 AC010350.1-201ENST00000504908 231 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 AC112198.1-201ENST00000505369 1220 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
PHGDHO43175 AC106872.4-201ENST00000510050 523 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 LTV1P1-201ENST00000510683 1237 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
PHGDHO43175 MTND5P13-201ENST00000513046 1079 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 RNU6-583P-201ENST00000516012 92 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 AC012339.2-201ENST00000523996 453 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.99□□□□□ -1.61
PHGDHO43175 AL121766.1-201ENST00000547436 487 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PHGDHO43175 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.99□□□□□ -1.61
PHGDHO43175 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.99□□□□□ -1.61
PHGDHO43175 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.99□□□□□ -1.61
PHGDHO43175 AC011477.5-201ENST00000586571 259 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.99□□□□□ -1.61
PHGDHO43175 VN1R92P-201ENST00000598511 928 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 AL122125.1-201ENST00000616999 600 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 MIR6864-201ENST00000617935 70 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 AC008443.7-201ENST00000622195 246 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PHGDHO43175 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PHGDHO43175 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PHGDHO43175 MTCO1P14-201ENST00000441695 1559 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 SMG1P6-201ENST00000532337 2930 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 CR381670.1-201ENST00000624291 1693 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 MTND5P24-201ENST00000438892 1767 ntBASIC4.99□□□□□ -1.61
PHGDHO43175 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.98□□□□□ -1.61
PHGDHO43175 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.98□□□□□ -1.61
PHGDHO43175 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
PHGDHO43175 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms