Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.93□□□□□ -1.78
LSM1O15116 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.93□□□□□ -1.78
LSM1O15116 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.93□□□□□ -1.78
LSM1O15116 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.93□□□□□ -1.78
LSM1O15116 AC137768.1-201ENST00000549998 553 ntBASIC3.93□□□□□ -1.78
LSM1O15116 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.93□□□□□ -1.78
LSM1O15116 AC012417.1-201ENST00000582307 1039 ntBASIC3.93□□□□□ -1.78
LSM1O15116 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.93□□□□□ -1.78
LSM1O15116 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LSM1O15116 AC242628.1-201ENST00000606810 391 ntBASIC3.93□□□□□ -1.78
LSM1O15116 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.93□□□□□ -1.78
LSM1O15116 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LSM1O15116 AC008121.2-201ENST00000614647 523 ntBASIC3.93□□□□□ -1.78
LSM1O15116 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.93□□□□□ -1.78
LSM1O15116 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LSM1O15116 AC116667.1-201ENST00000604855 2072 ntBASIC3.93□□□□□ -1.78
LSM1O15116 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
LSM1O15116 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LSM1O15116 AC000367.1-201ENST00000452711 1766 ntBASIC3.92□□□□□ -1.78
LSM1O15116 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
LSM1O15116 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LSM1O15116 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LSM1O15116 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LSM1O15116 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LSM1O15116 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
LSM1O15116 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.92□□□□□ -1.78
LSM1O15116 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.92□□□□□ -1.78
LSM1O15116 RNU4-31P-201ENST00000384211 141 ntBASIC3.92□□□□□ -1.78
LSM1O15116 MIR192-201ENST00000384915 110 ntBASIC3.92□□□□□ -1.78
LSM1O15116 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
LSM1O15116 CYB5AP4-201ENST00000396692 399 ntBASIC3.92□□□□□ -1.78
LSM1O15116 AC069218.2-201ENST00000411665 344 ntBASIC3.92□□□□□ -1.78
LSM1O15116 AC010385.1-201ENST00000412374 256 ntBASIC3.92□□□□□ -1.78
LSM1O15116 AC105402.1-201ENST00000413336 545 ntBASIC3.92□□□□□ -1.78
LSM1O15116 RANP4-201ENST00000413361 655 ntBASIC3.92□□□□□ -1.78
LSM1O15116 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LSM1O15116 CNOT7P1-201ENST00000429006 852 ntBASIC3.92□□□□□ -1.78
LSM1O15116 AC083863.1-201ENST00000438811 231 ntBASIC3.92□□□□□ -1.78
LSM1O15116 CBX1P1-201ENST00000440184 427 ntBASIC3.92□□□□□ -1.78
LSM1O15116 VN1R25P-201ENST00000443385 738 ntBASIC3.92□□□□□ -1.78
LSM1O15116 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.92□□□□□ -1.78
LSM1O15116 VN1R40P-201ENST00000455196 941 ntBASIC3.92□□□□□ -1.78
LSM1O15116 SNORD108-201ENST00000459332 71 ntBASIC3.92□□□□□ -1.78
LSM1O15116 RPL23AP14-201ENST00000468281 468 ntBASIC3.92□□□□□ -1.78
LSM1O15116 AC078785.3-201ENST00000476607 425 ntBASIC3.92□□□□□ -1.78
LSM1O15116 AC013356.1-201ENST00000489027 564 ntBASIC3.92□□□□□ -1.78
LSM1O15116 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.92□□□□□ -1.78
LSM1O15116 HMGB1P47-201ENST00000511281 589 ntBASIC3.92□□□□□ -1.78
LSM1O15116 AC099522.1-202ENST00000514718 367 ntBASIC3.92□□□□□ -1.78
LSM1O15116 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.92□□□□□ -1.78
LSM1O15116 TVP23BP1-201ENST00000557500 617 ntBASIC3.92□□□□□ -1.78
LSM1O15116 AC022968.1-201ENST00000567372 442 ntBASIC3.92□□□□□ -1.78
LSM1O15116 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.92□□□□□ -1.78
LSM1O15116 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.92□□□□□ -1.78
LSM1O15116 ZNF92P3-201ENST00000596594 954 ntBASIC3.92□□□□□ -1.78
LSM1O15116 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.92□□□□□ -1.78
LSM1O15116 AC020910.2-201ENST00000603635 610 ntBASIC3.92□□□□□ -1.78
LSM1O15116 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.92□□□□□ -1.78
LSM1O15116 AP000255.1-201ENST00000610276 676 ntBASIC3.92□□□□□ -1.78
LSM1O15116 MIR7151-201ENST00000617477 60 ntBASIC3.92□□□□□ -1.78
LSM1O15116 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.92□□□□□ -1.78
LSM1O15116 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.92□□□□□ -1.78
LSM1O15116 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
LSM1O15116 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
LSM1O15116 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
LSM1O15116 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
LSM1O15116 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LSM1O15116 AC012618.3-205ENST00000637896 1496 ntBASIC3.92□□□□□ -1.78
LSM1O15116 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
LSM1O15116 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.91□□□□□ -1.78
LSM1O15116 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
LSM1O15116 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
LSM1O15116 AL161909.1-201ENST00000397390 712 ntBASIC3.91□□□□□ -1.78
LSM1O15116 RNU4-25P-201ENST00000410569 230 ntBASIC3.91□□□□□ -1.78
LSM1O15116 AC011933.1-201ENST00000413334 321 ntBASIC3.91□□□□□ -1.78
LSM1O15116 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.91□□□□□ -1.78
LSM1O15116 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.91□□□□□ -1.78
LSM1O15116 COX6B1P7-201ENST00000430845 235 ntBASIC3.91□□□□□ -1.78
LSM1O15116 BTF3P10-201ENST00000433415 495 ntBASIC3.91□□□□□ -1.78
LSM1O15116 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.91□□□□□ -1.78
LSM1O15116 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.91□□□□□ -1.78
LSM1O15116 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.91□□□□□ -1.78
LSM1O15116 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LSM1O15116 HMGB3P8-201ENST00000449709 577 ntBASIC3.91□□□□□ -1.78
LSM1O15116 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.91□□□□□ -1.78
LSM1O15116 AC116533.1-201ENST00000459748 321 ntBASIC3.91□□□□□ -1.78
LSM1O15116 AL161747.1-201ENST00000480068 358 ntBASIC3.91□□□□□ -1.78
LSM1O15116 AC041039.1-201ENST00000485656 536 ntBASIC3.91□□□□□ -1.78
LSM1O15116 RN7SL271P-201ENST00000487601 295 ntBASIC3.91□□□□□ -1.78
LSM1O15116 RPL29P14-201ENST00000495837 428 ntBASIC3.91□□□□□ -1.78
LSM1O15116 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.91□□□□□ -1.78
LSM1O15116 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.91□□□□□ -1.78
LSM1O15116 HPRT1P2-201ENST00000505250 544 ntBASIC3.91□□□□□ -1.78
LSM1O15116 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.91□□□□□ -1.78
LSM1O15116 AC021146.1-201ENST00000511202 716 ntBASIC3.91□□□□□ -1.78
LSM1O15116 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.91□□□□□ -1.78
LSM1O15116 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.91□□□□□ -1.78
LSM1O15116 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.91□□□□□ -1.78
LSM1O15116 GNRHR2P1-201ENST00000555315 631 ntBASIC3.91□□□□□ -1.78
LSM1O15116 AL121594.4-201ENST00000556211 1196 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms