Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.1□□□□□ -1.91
SDCBPO00560 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.1□□□□□ -1.91
SDCBPO00560 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SDCBPO00560 ELOCP10-201ENST00000440624 327 ntBASIC3.1□□□□□ -1.91
SDCBPO00560 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.1□□□□□ -1.91
SDCBPO00560 MRPS31P2-201ENST00000451581 518 ntBASIC3.1□□□□□ -1.91
SDCBPO00560 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.1□□□□□ -1.91
SDCBPO00560 AL139099.1-201ENST00000497398 403 ntBASIC3.1□□□□□ -1.91
SDCBPO00560 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SDCBPO00560 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.1□□□□□ -1.91
SDCBPO00560 AC020593.1-201ENST00000507399 299 ntBASIC3.1□□□□□ -1.91
SDCBPO00560 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.1□□□□□ -1.91
SDCBPO00560 RNU6-1231P-201ENST00000517185 103 ntBASIC3.1□□□□□ -1.91
SDCBPO00560 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.1□□□□□ -1.91
SDCBPO00560 NDUFB9P3-201ENST00000521269 501 ntBASIC3.1□□□□□ -1.91
SDCBPO00560 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.1□□□□□ -1.91
SDCBPO00560 CYCSP30-201ENST00000546447 172 ntBASIC3.1□□□□□ -1.91
SDCBPO00560 AL121766.1-201ENST00000547436 487 ntBASIC3.1□□□□□ -1.91
SDCBPO00560 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.1□□□□□ -1.91
SDCBPO00560 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.1□□□□□ -1.91
SDCBPO00560 MIR4425-201ENST00000580572 84 ntBASIC3.1□□□□□ -1.91
SDCBPO00560 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC3.1□□□□□ -1.91
SDCBPO00560 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.1□□□□□ -1.91
SDCBPO00560 ELOCP34-201ENST00000604436 327 ntBASIC3.1□□□□□ -1.91
SDCBPO00560 AC092653.1-201ENST00000608509 531 ntBASIC3.1□□□□□ -1.91
SDCBPO00560 AC005344.1-201ENST00000613391 459 ntBASIC3.1□□□□□ -1.91
SDCBPO00560 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.1□□□□□ -1.91
SDCBPO00560 AL391261.4-201ENST00000616012 481 ntBASIC3.1□□□□□ -1.91
SDCBPO00560 AC022960.2-201ENST00000616300 666 ntBASIC3.1□□□□□ -1.91
SDCBPO00560 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.1□□□□□ -1.91
SDCBPO00560 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SDCBPO00560 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SDCBPO00560 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
SDCBPO00560 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SDCBPO00560 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SDCBPO00560 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
SDCBPO00560 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SDCBPO00560 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SDCBPO00560 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SDCBPO00560 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
SDCBPO00560 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.09□□□□□ -1.91
SDCBPO00560 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SDCBPO00560 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SDCBPO00560 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
SDCBPO00560 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SDCBPO00560 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SDCBPO00560 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SDCBPO00560 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SDCBPO00560 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
SDCBPO00560 U1.1-201ENST00000384101 164 ntBASIC3.09□□□□□ -1.91
SDCBPO00560 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.09□□□□□ -1.91
SDCBPO00560 AC006989.1-201ENST00000427212 131 ntBASIC3.09□□□□□ -1.91
SDCBPO00560 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC3.09□□□□□ -1.91
SDCBPO00560 AL158071.1-201ENST00000430315 461 ntBASIC3.09□□□□□ -1.91
SDCBPO00560 AC074367.1-201ENST00000438685 1125 ntBASIC3.09□□□□□ -1.91
SDCBPO00560 OR52Y1P-201ENST00000452418 828 ntBASIC3.09□□□□□ -1.91
SDCBPO00560 CLIC4P1-201ENST00000453177 535 ntBASIC3.09□□□□□ -1.91
SDCBPO00560 AL645939.1-201ENST00000453429 797 ntBASIC3.09□□□□□ -1.91
SDCBPO00560 AC099563.1-201ENST00000456086 418 ntBASIC3.09□□□□□ -1.91
SDCBPO00560 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.09□□□□□ -1.91
SDCBPO00560 RPL23AP73-201ENST00000492507 471 ntBASIC3.09□□□□□ -1.91
SDCBPO00560 AC068305.1-201ENST00000497406 726 ntBASIC3.09□□□□□ -1.91
SDCBPO00560 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.09□□□□□ -1.91
SDCBPO00560 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.09□□□□□ -1.91
SDCBPO00560 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.09□□□□□ -1.91
SDCBPO00560 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SDCBPO00560 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
SDCBPO00560 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.09□□□□□ -1.91
SDCBPO00560 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SDCBPO00560 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.91
SDCBPO00560 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.09□□□□□ -1.91
SDCBPO00560 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.09□□□□□ -1.91
SDCBPO00560 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.09□□□□□ -1.91
SDCBPO00560 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.09□□□□□ -1.91
SDCBPO00560 VN1R79P-201ENST00000593540 513 ntBASIC3.09□□□□□ -1.91
SDCBPO00560 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.09□□□□□ -1.91
SDCBPO00560 AC010200.2-201ENST00000605098 235 ntBASIC3.09□□□□□ -1.91
SDCBPO00560 GMCL1P2-201ENST00000605230 823 ntBASIC3.09□□□□□ -1.91
SDCBPO00560 AC017076.1-201ENST00000607613 578 ntBASIC3.09□□□□□ -1.91
SDCBPO00560 AC016252.1-201ENST00000609721 474 ntBASIC3.09□□□□□ -1.91
SDCBPO00560 AC020978.9-201ENST00000624380 1141 ntBASIC3.09□□□□□ -1.91
SDCBPO00560 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.09□□□□□ -1.91
SDCBPO00560 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SDCBPO00560 AC007656.2-201ENST00000624902 4547 ntBASIC3.09□□□□□ -1.92
SDCBPO00560 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
SDCBPO00560 AP004289.2-201ENST00000444413 1457 ntBASIC3.09□□□□□ -1.92
SDCBPO00560 PWAR6-201ENST00000552334 4618 ntBASIC3.08□□□□□ -1.92
SDCBPO00560 AL451142.2-201ENST00000429076 2090 ntBASIC3.08□□□□□ -1.92
SDCBPO00560 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
SDCBPO00560 AC007529.1-201ENST00000418574 2178 ntBASIC3.08□□□□□ -1.92
SDCBPO00560 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
SDCBPO00560 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SDCBPO00560 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SDCBPO00560 SOD2P1-201ENST00000396543 562 ntBASIC3.08□□□□□ -1.92
SDCBPO00560 PPIAP31-201ENST00000405422 495 ntBASIC3.08□□□□□ -1.92
SDCBPO00560 RN7SKP285-201ENST00000410137 318 ntBASIC3.08□□□□□ -1.92
SDCBPO00560 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.08□□□□□ -1.92
SDCBPO00560 RAB9AP4-201ENST00000415230 609 ntBASIC3.08□□□□□ -1.92
SDCBPO00560 MTND2P15-201ENST00000418575 892 ntBASIC3.08□□□□□ -1.92
SDCBPO00560 AL691447.1-201ENST00000419456 387 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms