Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC090948.1-201ENST00000607464 549 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.06□□□□□ -1.76
SLC28A1O00337 AC233309.1-201ENST00000619522 751 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SLC28A1O00337 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.06□□□□□ -1.76
SLC28A1O00337 AP001784.1-201ENST00000624107 428 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 AC020978.9-201ENST00000624380 1141 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 AC106730.3-201ENST00000624568 641 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 AP005264.7-201ENST00000625003 745 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.06□□□□□ -1.76
SLC28A1O00337 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SLC28A1O00337 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SLC28A1O00337 EIF2AP4-201ENST00000424793 1781 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
SLC28A1O00337 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.06□□□□□ -1.76
SLC28A1O00337 AC025031.4-201ENST00000621248 3271 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 AC073055.1-201ENST00000456901 1621 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SLC28A1O00337 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SLC28A1O00337 AC009951.1-201ENST00000623674 2614 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SLC28A1O00337 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SLC28A1O00337 XPOTP1-201ENST00000443317 2398 ntBASIC4.05□□□□□ -1.76
SLC28A1O00337 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.05□□□□□ -1.76
SLC28A1O00337 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SLC28A1O00337 RNU6-354P-201ENST00000383862 107 ntBASIC4.05□□□□□ -1.76
SLC28A1O00337 RNU6-610P-201ENST00000384264 107 ntBASIC4.05□□□□□ -1.76
SLC28A1O00337 SNORA37-201ENST00000384504 129 ntBASIC4.05□□□□□ -1.76
SLC28A1O00337 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SLC28A1O00337 DNAJC19P6-201ENST00000401853 280 ntBASIC4.05□□□□□ -1.76
SLC28A1O00337 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.05□□□□□ -1.76
SLC28A1O00337 RAC1P3-201ENST00000416129 580 ntBASIC4.05□□□□□ -1.76
SLC28A1O00337 P2RY10P2-201ENST00000416730 913 ntBASIC4.05□□□□□ -1.76
SLC28A1O00337 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.05□□□□□ -1.76
SLC28A1O00337 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.05□□□□□ -1.76
SLC28A1O00337 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.05□□□□□ -1.76
SLC28A1O00337 AL096829.2-201ENST00000446582 742 ntBASIC4.05□□□□□ -1.76
SLC28A1O00337 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.05□□□□□ -1.76
SLC28A1O00337 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SLC28A1O00337 AL451050.1-201ENST00000450126 415 ntBASIC4.05□□□□□ -1.76
SLC28A1O00337 AL162388.1-201ENST00000450912 352 ntBASIC4.05□□□□□ -1.76
SLC28A1O00337 AC233982.1-201ENST00000451247 436 ntBASIC4.05□□□□□ -1.76
SLC28A1O00337 AC008280.2-201ENST00000455473 307 ntBASIC4.05□□□□□ -1.76
SLC28A1O00337 BX248409.1-201ENST00000455497 255 ntBASIC4.05□□□□□ -1.76
SLC28A1O00337 MTND2P28-201ENST00000457540 1044 ntBASIC4.05□□□□□ -1.76
SLC28A1O00337 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.05□□□□□ -1.76
SLC28A1O00337 RN7SL98P-201ENST00000462271 300 ntBASIC4.05□□□□□ -1.76
SLC28A1O00337 AC126121.1-201ENST00000482313 553 ntBASIC4.05□□□□□ -1.76
SLC28A1O00337 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.05□□□□□ -1.76
SLC28A1O00337 AC090071.1-201ENST00000507713 644 ntBASIC4.05□□□□□ -1.76
SLC28A1O00337 RN7SKP92-201ENST00000517266 244 ntBASIC4.05□□□□□ -1.76
SLC28A1O00337 DEFB109D-201ENST00000529497 240 ntBASIC4.05□□□□□ -1.76
SLC28A1O00337 SERPINE4P-201ENST00000554978 281 ntBASIC4.05□□□□□ -1.76
SLC28A1O00337 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.05□□□□□ -1.76
SLC28A1O00337 AC023824.3-201ENST00000569003 562 ntBASIC4.05□□□□□ -1.76
SLC28A1O00337 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
SLC28A1O00337 VN1R88P-201ENST00000596787 292 ntBASIC4.05□□□□□ -1.76
SLC28A1O00337 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.05□□□□□ -1.76
SLC28A1O00337 BNIP3P4-201ENST00000604946 565 ntBASIC4.05□□□□□ -1.76
SLC28A1O00337 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.05□□□□□ -1.76
SLC28A1O00337 AC078880.5-201ENST00000617845 421 ntBASIC4.05□□□□□ -1.76
SLC28A1O00337 AL035461.2-201ENST00000619201 524 ntBASIC4.05□□□□□ -1.76
SLC28A1O00337 AC006249.1-201ENST00000621223 471 ntBASIC4.05□□□□□ -1.76
SLC28A1O00337 AP000720.1-201ENST00000625091 483 ntBASIC4.05□□□□□ -1.76
SLC28A1O00337 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.05□□□□□ -1.76
SLC28A1O00337 IQCB2P-201ENST00000401788 1633 ntBASIC4.05□□□□□ -1.76
SLC28A1O00337 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SLC28A1O00337 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.05□□□□□ -1.76
SLC28A1O00337 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.05□□□□□ -1.76
SLC28A1O00337 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SLC28A1O00337 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.04□□□□□ -1.76
SLC28A1O00337 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.04□□□□□ -1.76
SLC28A1O00337 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SLC28A1O00337 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.04□□□□□ -1.76
SLC28A1O00337 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SLC28A1O00337 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SLC28A1O00337 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.04□□□□□ -1.76
SLC28A1O00337 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SLC28A1O00337 RNU1-14P-201ENST00000362759 152 ntBASIC4.04□□□□□ -1.76
SLC28A1O00337 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SLC28A1O00337 RNU6-1279P-201ENST00000383917 103 ntBASIC4.04□□□□□ -1.76
SLC28A1O00337 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SLC28A1O00337 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SLC28A1O00337 AL583835.1-201ENST00000399570 407 ntBASIC4.04□□□□□ -1.76
SLC28A1O00337 RNA5SP36-201ENST00000410197 133 ntBASIC4.04□□□□□ -1.76
SLC28A1O00337 RN7SKP235-201ENST00000410662 305 ntBASIC4.04□□□□□ -1.76
SLC28A1O00337 RNA5SP39-201ENST00000411245 120 ntBASIC4.04□□□□□ -1.76
SLC28A1O00337 AC004987.3-201ENST00000413879 771 ntBASIC4.04□□□□□ -1.76
SLC28A1O00337 AC007394.1-201ENST00000421941 531 ntBASIC4.04□□□□□ -1.76
SLC28A1O00337 AC241520.1-201ENST00000422654 1099 ntBASIC4.04□□□□□ -1.76
SLC28A1O00337 NPM1P34-201ENST00000428821 893 ntBASIC4.04□□□□□ -1.76
SLC28A1O00337 RPL21P110-201ENST00000433345 446 ntBASIC4.04□□□□□ -1.76
SLC28A1O00337 LYPLA1P1-201ENST00000434514 622 ntBASIC4.04□□□□□ -1.76
SLC28A1O00337 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.04□□□□□ -1.76
SLC28A1O00337 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SLC28A1O00337 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.04□□□□□ -1.76
SLC28A1O00337 MTND1P33-201ENST00000446251 917 ntBASIC4.04□□□□□ -1.76
SLC28A1O00337 GXYLT1P1-201ENST00000446657 490 ntBASIC4.04□□□□□ -1.76
SLC28A1O00337 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SLC28A1O00337 AC015724.1-201ENST00000478577 156 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms