Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
NACAE9PAV3 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
NACAE9PAV3 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
NACAE9PAV3 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.09□□□□□ -1.91
NACAE9PAV3 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NACAE9PAV3 PARP1P2-201ENST00000556806 195 ntBASIC3.09□□□□□ -1.91
NACAE9PAV3 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.09□□□□□ -1.91
NACAE9PAV3 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.09□□□□□ -1.91
NACAE9PAV3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.09□□□□□ -1.91
NACAE9PAV3 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.09□□□□□ -1.91
NACAE9PAV3 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.09□□□□□ -1.91
NACAE9PAV3 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.09□□□□□ -1.91
NACAE9PAV3 AC093673.2-201ENST00000609674 331 ntBASIC3.09□□□□□ -1.91
NACAE9PAV3 AL445423.1-201ENST00000609941 536 ntBASIC3.09□□□□□ -1.91
NACAE9PAV3 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.09□□□□□ -1.91
NACAE9PAV3 AL133243.1-201ENST00000614487 366 ntBASIC3.09□□□□□ -1.91
NACAE9PAV3 AC011472.4-201ENST00000615848 491 ntBASIC3.09□□□□□ -1.91
NACAE9PAV3 AC091905.2-201ENST00000623143 306 ntBASIC3.09□□□□□ -1.91
NACAE9PAV3 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.09□□□□□ -1.91
NACAE9PAV3 AC140479.6-201ENST00000633535 357 ntBASIC3.09□□□□□ -1.91
NACAE9PAV3 AC010300.1-201ENST00000600671 5134 ntBASIC3.09□□□□□ -1.91
NACAE9PAV3 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
NACAE9PAV3 ASNSP1-201ENST00000518311 1939 ntBASIC3.09□□□□□ -1.91
NACAE9PAV3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
NACAE9PAV3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
NACAE9PAV3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
NACAE9PAV3 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
NACAE9PAV3 SEPT7P7-201ENST00000420492 1301 ntBASIC3.09□□□□□ -1.92
NACAE9PAV3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
NACAE9PAV3 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.92
NACAE9PAV3 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.08□□□□□ -1.92
NACAE9PAV3 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NACAE9PAV3 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
NACAE9PAV3 RNA5SP513-201ENST00000364648 118 ntBASIC3.08□□□□□ -1.92
NACAE9PAV3 AC019155.1-201ENST00000382242 574 ntBASIC3.08□□□□□ -1.92
NACAE9PAV3 RPL21P65-201ENST00000406094 466 ntBASIC3.08□□□□□ -1.92
NACAE9PAV3 RWDD4P2-201ENST00000426392 563 ntBASIC3.08□□□□□ -1.92
NACAE9PAV3 USP12PY-201ENST00000427677 1064 ntBASIC3.08□□□□□ -1.92
NACAE9PAV3 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.08□□□□□ -1.92
NACAE9PAV3 RPL23AP89-201ENST00000439324 255 ntBASIC3.08□□□□□ -1.92
NACAE9PAV3 AL353748.1-201ENST00000440753 474 ntBASIC3.08□□□□□ -1.92
NACAE9PAV3 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.08□□□□□ -1.92
NACAE9PAV3 AC008280.2-201ENST00000455473 307 ntBASIC3.08□□□□□ -1.92
NACAE9PAV3 AC103987.1-201ENST00000473394 348 ntBASIC3.08□□□□□ -1.92
NACAE9PAV3 AC012158.1-204ENST00000483430 465 ntBASIC3.08□□□□□ -1.92
NACAE9PAV3 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.08□□□□□ -1.92
NACAE9PAV3 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.08□□□□□ -1.92
NACAE9PAV3 snoU109.6-201ENST00000516831 118 ntBASIC3.08□□□□□ -1.92
NACAE9PAV3 MTCYBP19-201ENST00000517463 1124 ntBASIC3.08□□□□□ -1.92
NACAE9PAV3 AC090281.1-201ENST00000523019 276 ntBASIC3.08□□□□□ -1.92
NACAE9PAV3 LRRC6P1-201ENST00000532188 885 ntBASIC3.08□□□□□ -1.92
NACAE9PAV3 OR8X1P-201ENST00000534542 869 ntBASIC3.08□□□□□ -1.92
NACAE9PAV3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.08□□□□□ -1.92
NACAE9PAV3 AL049838.1-201ENST00000563647 981 ntBASIC3.08□□□□□ -1.92
NACAE9PAV3 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.08□□□□□ -1.92
NACAE9PAV3 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.08□□□□□ -1.92
NACAE9PAV3 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.08□□□□□ -1.92
NACAE9PAV3 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NACAE9PAV3 AL022067.1-201ENST00000602426 454 ntBASIC3.08□□□□□ -1.92
NACAE9PAV3 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.08□□□□□ -1.92
NACAE9PAV3 AL158062.1-201ENST00000619632 745 ntBASIC3.08□□□□□ -1.92
NACAE9PAV3 AP005019.3-201ENST00000620418 560 ntBASIC3.08□□□□□ -1.92
NACAE9PAV3 AC138907.10-201ENST00000623708 983 ntBASIC3.08□□□□□ -1.92
NACAE9PAV3 AL049536.1-201ENST00000625043 744 ntBASIC3.08□□□□□ -1.92
NACAE9PAV3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.08□□□□□ -1.92
NACAE9PAV3 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NACAE9PAV3 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
NACAE9PAV3 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
NACAE9PAV3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
NACAE9PAV3 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NACAE9PAV3 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NACAE9PAV3 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NACAE9PAV3 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NACAE9PAV3 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
NACAE9PAV3 ERCC6-202ENST00000374127 1782 ntBASIC3.08□□□□□ -1.92
NACAE9PAV3 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.08□□□□□ -1.92
NACAE9PAV3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NACAE9PAV3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NACAE9PAV3 LINC02471-203ENST00000641941 4752 ntBASIC3.08□□□□□ -1.92
NACAE9PAV3 AC074029.4-201ENST00000624796 1859 ntBASIC3.08□□□□□ -1.92
NACAE9PAV3 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NACAE9PAV3 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NACAE9PAV3 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
NACAE9PAV3 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NACAE9PAV3 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.08□□□□□ -1.92
NACAE9PAV3 AL158825.1-201ENST00000414735 521 ntBASIC3.08□□□□□ -1.92
NACAE9PAV3 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.08□□□□□ -1.92
NACAE9PAV3 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.08□□□□□ -1.92
NACAE9PAV3 AC013262.1-201ENST00000426710 252 ntBASIC3.08□□□□□ -1.92
NACAE9PAV3 EEF1A1P1-201ENST00000447052 739 ntBASIC3.08□□□□□ -1.92
NACAE9PAV3 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.08□□□□□ -1.92
NACAE9PAV3 AL162591.2-201ENST00000449634 317 ntBASIC3.08□□□□□ -1.92
NACAE9PAV3 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.08□□□□□ -1.92
NACAE9PAV3 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.08□□□□□ -1.92
NACAE9PAV3 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.08□□□□□ -1.92
NACAE9PAV3 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.08□□□□□ -1.92
NACAE9PAV3 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.08□□□□□ -1.92
NACAE9PAV3 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.08□□□□□ -1.92
NACAE9PAV3 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.08□□□□□ -1.92
NACAE9PAV3 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms