Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 RPS20P21-201ENST00000466859 343 ntBASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 ACTG1P13-201ENST00000486987 1043 ntBASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 AC093267.1-201ENST00000489176 961 ntBASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 RN7SKP141-201ENST00000516167 338 ntBASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 AP006245.1-201ENST00000522549 120 ntBASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 RFPL1S-203ENST00000539579 330 ntBASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 CBX3P5-201ENST00000552017 521 ntBASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 AC007224.1-201ENST00000564410 144 ntBASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 AC022893.2-201ENST00000564832 3296 ntBASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 AC007529.1-201ENST00000418574 2178 ntBASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 AC068647.1-201ENST00000489539 2265 ntBASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 U3.39-201ENST00000408569 239 ntBASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 AC096644.3-201ENST00000416788 338 ntBASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 MRPS31P2-201ENST00000451581 518 ntBASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 CEACAMP10-202ENST00000495431 496 ntBASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 AC026784.1-201ENST00000507986 352 ntBASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 PCBP2P3-201ENST00000509726 843 ntBASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 AC026402.1-201ENST00000513642 170 ntBASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 RNU6-579P-201ENST00000516879 102 ntBASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 IGKV2D-10-201ENST00000520194 281 ntBASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 MIR5685-201ENST00000579080 79 ntBASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 BNIP3P38-201ENST00000601117 544 ntBASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 uc_338.32-201ENST00000615087 172 ntBASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 AC000123.2-201ENST00000623124 461 ntBASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 AP001486.2-201ENST00000561652 5113 ntBASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.23□□□□□ -1.89
TRAV27A0A087WT01 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 MIR184-201ENST00000384962 84 ntBASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 RPL7P2-201ENST00000427639 268 ntBASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 AC004975.1-201ENST00000428733 208 ntBASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 BTG3P1-201ENST00000435859 716 ntBASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 RNU2-27P-201ENST00000516185 142 ntBASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 HSPE1P5-201ENST00000561489 272 ntBASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 AC090912.3-201ENST00000609775 533 ntBASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 AC022149.2-201ENST00000621061 203 ntBASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 AC119674.1-207ENST00000641355 633 ntBASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.22□□□□□ -1.89
TRAV27A0A087WT01 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms