Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDC42BPBQ9Y5S2 Y_RNA.510-201ENST00000384511 114 ntBASIC5.31□□□□□ -1.56
CDC42BPBQ9Y5S2 ATP5HP2-201ENST00000433885 485 ntBASIC5.31□□□□□ -1.56
CDC42BPBQ9Y5S2 NPM1P48-201ENST00000436002 853 ntBASIC5.31□□□□□ -1.56
CDC42BPBQ9Y5S2 AC080014.1-201ENST00000496877 1201 ntBASIC5.31□□□□□ -1.56
CDC42BPBQ9Y5S2 STMN1P2-201ENST00000508435 439 ntBASIC5.31□□□□□ -1.56
CDC42BPBQ9Y5S2 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.31□□□□□ -1.56
CDC42BPBQ9Y5S2 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.31□□□□□ -1.56
CDC42BPBQ9Y5S2 AC138932.5-201ENST00000617759 563 ntBASIC5.31□□□□□ -1.56
CDC42BPBQ9Y5S2 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDC42BPBQ9Y5S2 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 Z95331.1-201ENST00000623075 23112 ntBASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 UBA52P6-201ENST00000399822 382 ntBASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 AC063979.1-201ENST00000415539 377 ntBASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 HSPE1P27-201ENST00000430808 296 ntBASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 UBE2V1P1-201ENST00000430836 445 ntBASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 AC099563.1-201ENST00000456086 418 ntBASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 RN7SKP83-201ENST00000516512 178 ntBASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 AL583832.1-201ENST00000603227 784 ntBASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 AC084036.1-201ENST00000609190 508 ntBASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 MIR7851-201ENST00000610611 160 ntBASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 DDX6P1-205ENST00000441966 1436 ntBASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDC42BPBQ9Y5S2 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CDC42BPBQ9Y5S2 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CDC42BPBQ9Y5S2 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CDC42BPBQ9Y5S2 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDC42BPBQ9Y5S2 AC092435.3-201ENST00000565538 3654 ntBASIC5.29□□□□□ -1.56
CDC42BPBQ9Y5S2 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CDC42BPBQ9Y5S2 MIR513A2-201ENST00000385249 127 ntBASIC5.29□□□□□ -1.56
CDC42BPBQ9Y5S2 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.29□□□□□ -1.56
CDC42BPBQ9Y5S2 RPL5P30-201ENST00000465511 891 ntBASIC5.29□□□□□ -1.56
CDC42BPBQ9Y5S2 RN7SL504P-201ENST00000494496 287 ntBASIC5.29□□□□□ -1.56
CDC42BPBQ9Y5S2 HMGB1P21-201ENST00000502313 581 ntBASIC5.29□□□□□ -1.56
CDC42BPBQ9Y5S2 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC5.29□□□□□ -1.56
CDC42BPBQ9Y5S2 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.29□□□□□ -1.56
CDC42BPBQ9Y5S2 FCF1P8-201ENST00000510322 597 ntBASIC5.29□□□□□ -1.56
CDC42BPBQ9Y5S2 FTH1P11-201ENST00000517577 551 ntBASIC5.29□□□□□ -1.56
CDC42BPBQ9Y5S2 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.29□□□□□ -1.56
CDC42BPBQ9Y5S2 AL669942.2-201ENST00000620352 697 ntBASIC5.29□□□□□ -1.56
CDC42BPBQ9Y5S2 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDC42BPBQ9Y5S2 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDC42BPBQ9Y5S2 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.29□□□□□ -1.56
CDC42BPBQ9Y5S2 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CDC42BPBQ9Y5S2 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDC42BPBQ9Y5S2 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
CDC42BPBQ9Y5S2 RHOT1P2-201ENST00000366423 333 ntBASIC5.28□□□□□ -1.56
CDC42BPBQ9Y5S2 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDC42BPBQ9Y5S2 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.28□□□□□ -1.56
CDC42BPBQ9Y5S2 ATP6V0E1P4-201ENST00000427294 242 ntBASIC5.28□□□□□ -1.56
CDC42BPBQ9Y5S2 NANOGNBP1-201ENST00000448444 480 ntBASIC5.28□□□□□ -1.56
CDC42BPBQ9Y5S2 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.28□□□□□ -1.56
CDC42BPBQ9Y5S2 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.28□□□□□ -1.56
CDC42BPBQ9Y5S2 MIR4672-201ENST00000583126 81 ntBASIC5.28□□□□□ -1.56
CDC42BPBQ9Y5S2 AC063952.1-203ENST00000634410 658 ntBASIC5.28□□□□□ -1.56
CDC42BPBQ9Y5S2 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.28□□□□□ -1.56
CDC42BPBQ9Y5S2 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CDC42BPBQ9Y5S2 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDC42BPBQ9Y5S2 SMG1P4-204ENST00000523028 4131 ntBASIC5.28□□□□□ -1.56
CDC42BPBQ9Y5S2 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC5.28□□□□□ -1.56
CDC42BPBQ9Y5S2 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
CDC42BPBQ9Y5S2 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CDC42BPBQ9Y5S2 U3.26-201ENST00000391236 204 ntBASIC5.28□□□□□ -1.56
CDC42BPBQ9Y5S2 AC092809.1-201ENST00000441469 474 ntBASIC5.28□□□□□ -1.56
CDC42BPBQ9Y5S2 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDC42BPBQ9Y5S2 AC084357.1-201ENST00000473404 255 ntBASIC5.28□□□□□ -1.56
CDC42BPBQ9Y5S2 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC5.28□□□□□ -1.56
CDC42BPBQ9Y5S2 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.28□□□□□ -1.56
CDC42BPBQ9Y5S2 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC5.28□□□□□ -1.56
CDC42BPBQ9Y5S2 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDC42BPBQ9Y5S2 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.28□□□□□ -1.56
CDC42BPBQ9Y5S2 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDC42BPBQ9Y5S2 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDC42BPBQ9Y5S2 SNORA38.1-201ENST00000364172 131 ntBASIC5.27□□□□□ -1.57
CDC42BPBQ9Y5S2 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.27□□□□□ -1.57
CDC42BPBQ9Y5S2 RPL21P109-201ENST00000422213 475 ntBASIC5.27□□□□□ -1.57
CDC42BPBQ9Y5S2 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.27□□□□□ -1.57
CDC42BPBQ9Y5S2 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.27□□□□□ -1.57
CDC42BPBQ9Y5S2 RPL7P38-201ENST00000488396 739 ntBASIC5.27□□□□□ -1.57
CDC42BPBQ9Y5S2 HMGB3P13-201ENST00000511263 607 ntBASIC5.27□□□□□ -1.57
CDC42BPBQ9Y5S2 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms