Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 MIR5186-201ENST00000577504 120 ntBASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 H3F3BP2-201ENST00000583907 357 ntBASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 AC024940.4-201ENST00000605507 246 ntBASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 AC012360.2-201ENST00000609349 391 ntBASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 AL136295.6-201ENST00000610486 658 ntBASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 AC098679.4-201ENST00000624241 654 ntBASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 AC074101.1-201ENST00000637861 241 ntBASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 AC117529.2-201ENST00000512159 2068 ntBASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 AC006206.1-201ENST00000544842 3387 ntBASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHGA3Q9Y5H0 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 RNA5SP305-201ENST00000362665 119 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 RNA5SP443-201ENST00000363083 132 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 RNA5SP391-201ENST00000363456 119 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 SNORA26.8-201ENST00000391306 124 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 AL133482.1-201ENST00000415988 498 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 NPM1P11-201ENST00000417106 855 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 AC093655.2-201ENST00000425735 631 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 AC096638.2-201ENST00000434965 711 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 NPM1P33-201ENST00000438918 872 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 RPL12P3-201ENST00000440080 396 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 RPL39P6-201ENST00000448289 150 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 RPL36AP33-201ENST00000450395 310 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 AL389915.2-201ENST00000454576 441 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 TRBV26-201ENST00000456572 344 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 AC097493.1-201ENST00000463958 372 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 RN7SL188P-201ENST00000469842 285 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 AC087879.1-201ENST00000474343 374 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 RN7SL97P-201ENST00000486780 299 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 AC109486.1-201ENST00000486833 374 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 RN7SL808P-201ENST00000496066 299 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 RN7SL591P-201ENST00000496150 292 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 AC090071.1-201ENST00000507713 644 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 MTND3P5-201ENST00000512798 333 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 AL671862.1-201ENST00000515851 349 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 OR5D15P-201ENST00000531671 942 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 CYCSP28-201ENST00000534284 321 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 MIR4512-201ENST00000583257 77 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 AC087763.1-201ENST00000603391 286 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 RN7SKP299-201ENST00000606679 301 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 AC106028.5-201ENST00000610332 395 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 AC078899.5-201ENST00000612475 178 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 AC021242.1-201ENST00000507315 2035 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 MTND5P24-201ENST00000438892 1767 ntBASIC5.24□□□□□ -1.57
PCDHGA3Q9Y5H0 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 AC114546.3-201ENST00000623582 1734 ntBASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 SAGE2P-201ENST00000420011 2126 ntBASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 AL672167.1-206ENST00000356293 943 ntBASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 MIR133B-201ENST00000362210 119 ntBASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 U3.2-201ENST00000362981 210 ntBASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 RNU6-984P-201ENST00000363236 109 ntBASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 MIR550A3-201ENST00000390735 95 ntBASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 AL645733.1-201ENST00000402250 217 ntBASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.23□□□□□ -1.57
PCDHGA3Q9Y5H0 RPL7P8-201ENST00000411964 730 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms