Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 AC139769.3-201ENST00000618383 175 ntBASIC4.31□□□□□ -1.72
NCKAP1Q9Y2A7 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.31□□□□□ -1.72
NCKAP1Q9Y2A7 AC067852.7-201ENST00000623270 535 ntBASIC4.31□□□□□ -1.72
NCKAP1Q9Y2A7 RNA5SP196-201ENST00000625967 102 ntBASIC4.31□□□□□ -1.72
NCKAP1Q9Y2A7 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NCKAP1Q9Y2A7 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NCKAP1Q9Y2A7 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NCKAP1Q9Y2A7 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
NCKAP1Q9Y2A7 AC017104.4-201ENST00000636283 1592 ntBASIC4.31□□□□□ -1.72
NCKAP1Q9Y2A7 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
NCKAP1Q9Y2A7 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NCKAP1Q9Y2A7 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NCKAP1Q9Y2A7 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 RNU1-20P-201ENST00000363314 162 ntBASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 AL445189.1-201ENST00000405722 338 ntBASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 AC073310.1-201ENST00000423226 1033 ntBASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 RPS12P5-201ENST00000423449 371 ntBASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 RWDD4P2-201ENST00000426392 563 ntBASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 PPIAP13-201ENST00000434706 478 ntBASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 RPL7P29-201ENST00000437151 728 ntBASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 AC006994.1-201ENST00000438212 839 ntBASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 RPL23AP46-201ENST00000438548 490 ntBASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 CBX1P4-201ENST00000439415 457 ntBASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 NDUFS5P3-201ENST00000450668 321 ntBASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 RPL7P22-201ENST00000466005 733 ntBASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 AC016550.1-201ENST00000505348 785 ntBASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 AC112518.2-201ENST00000508565 425 ntBASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 MTCO3P27-201ENST00000514397 196 ntBASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 AC099522.1-202ENST00000514718 367 ntBASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 AP003102.1-201ENST00000525638 661 ntBASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 AC025260.1-201ENST00000548858 430 ntBASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 AC006116.5-201ENST00000591936 559 ntBASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 AL354984.3-201ENST00000604803 325 ntBASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 AP002360.3-201ENST00000607673 710 ntBASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
NCKAP1Q9Y2A7 AC007390.2-201ENST00000606229 3803 ntBASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 AC096656.1-201ENST00000623826 1364 ntBASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 GCNT6-201ENST00000379591 934 ntBASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 RNU6-354P-201ENST00000383862 107 ntBASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 RNU6-1279P-201ENST00000383917 103 ntBASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 RNU6-317P-201ENST00000384031 107 ntBASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 RNU6-610P-201ENST00000384264 107 ntBASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 RNU1-44P-201ENST00000384453 163 ntBASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 MIR92A2-201ENST00000385299 75 ntBASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 AL078604.1-201ENST00000404609 466 ntBASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 HMGB3P18-201ENST00000406327 590 ntBASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 CDY14P-201ENST00000431260 1014 ntBASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 RPS24P8-201ENST00000431490 402 ntBASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 MRPL50P1-201ENST00000431951 384 ntBASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 CDY12P-201ENST00000440679 1015 ntBASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 CDC27P1-201ENST00000445384 715 ntBASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 CDY13P-201ENST00000445813 1015 ntBASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 AC239367.2-201ENST00000447309 705 ntBASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 CDY23P-201ENST00000451661 1014 ntBASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 MTND2P39-201ENST00000457230 764 ntBASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 AL132838.2-201ENST00000492041 314 ntBASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 AP003355.1-201ENST00000518956 587 ntBASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 SMARCE1P4-201ENST00000523647 241 ntBASIC4.29□□□□□ -1.72
NCKAP1Q9Y2A7 AC105233.3-201ENST00000531125 744 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms