Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC010374.2-201ENST00000512933 535 ntBASIC3.61□□□□□ -1.83
CHD7Q9P2D1 COX6B1P6-201ENST00000522347 255 ntBASIC3.61□□□□□ -1.83
CHD7Q9P2D1 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.61□□□□□ -1.83
CHD7Q9P2D1 SNORD91B-202ENST00000608459 222 ntBASIC3.61□□□□□ -1.83
CHD7Q9P2D1 AL031658.2-201ENST00000616850 651 ntBASIC3.61□□□□□ -1.83
CHD7Q9P2D1 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.61□□□□□ -1.83
CHD7Q9P2D1 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHD7Q9P2D1 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHD7Q9P2D1 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.61□□□□□ -1.83
CHD7Q9P2D1 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
CHD7Q9P2D1 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CHD7Q9P2D1 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CHD7Q9P2D1 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.61□□□□□ -1.83
CHD7Q9P2D1 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHD7Q9P2D1 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CHD7Q9P2D1 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CHD7Q9P2D1 SNORA54-201ENST00000384281 123 ntBASIC3.6□□□□□ -1.83
CHD7Q9P2D1 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.6□□□□□ -1.83
CHD7Q9P2D1 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.6□□□□□ -1.83
CHD7Q9P2D1 PPBPP1-201ENST00000510807 373 ntBASIC3.6□□□□□ -1.83
CHD7Q9P2D1 AC008489.1-201ENST00000524271 483 ntBASIC3.6□□□□□ -1.83
CHD7Q9P2D1 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.6□□□□□ -1.83
CHD7Q9P2D1 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.6□□□□□ -1.83
CHD7Q9P2D1 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.6□□□□□ -1.83
CHD7Q9P2D1 RPL23AP92-201ENST00000603609 255 ntBASIC3.6□□□□□ -1.83
CHD7Q9P2D1 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.6□□□□□ -1.83
CHD7Q9P2D1 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.6□□□□□ -1.83
CHD7Q9P2D1 RNU1-70P-201ENST00000362618 164 ntBASIC3.6□□□□□ -1.83
CHD7Q9P2D1 RSL24D1P1-201ENST00000404972 493 ntBASIC3.6□□□□□ -1.83
CHD7Q9P2D1 RN7SKP97-201ENST00000410966 333 ntBASIC3.6□□□□□ -1.83
CHD7Q9P2D1 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.6□□□□□ -1.83
CHD7Q9P2D1 AC239809.1-201ENST00000450470 217 ntBASIC3.6□□□□□ -1.83
CHD7Q9P2D1 CCDC75P1-201ENST00000469247 791 ntBASIC3.6□□□□□ -1.83
CHD7Q9P2D1 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.6□□□□□ -1.83
CHD7Q9P2D1 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.6□□□□□ -1.83
CHD7Q9P2D1 AC010503.3-201ENST00000594355 540 ntBASIC3.6□□□□□ -1.83
CHD7Q9P2D1 AC100793.4-201ENST00000613683 429 ntBASIC3.6□□□□□ -1.83
CHD7Q9P2D1 AC068722.2-201ENST00000618734 544 ntBASIC3.6□□□□□ -1.83
CHD7Q9P2D1 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHD7Q9P2D1 MIR422A-201ENST00000362286 90 ntBASIC3.6□□□□□ -1.83
CHD7Q9P2D1 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.6□□□□□ -1.83
CHD7Q9P2D1 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.6□□□□□ -1.83
CHD7Q9P2D1 AC104763.2-201ENST00000604179 382 ntBASIC3.6□□□□□ -1.83
CHD7Q9P2D1 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.6□□□□□ -1.83
CHD7Q9P2D1 AL590240.3-201ENST00000621416 943 ntBASIC3.6□□□□□ -1.83
CHD7Q9P2D1 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
CHD7Q9P2D1 DMD-205ENST00000359836 7339 ntTSL 5 BASIC3.59□□□□□ -1.83
CHD7Q9P2D1 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CHD7Q9P2D1 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CHD7Q9P2D1 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.59□□□□□ -1.83
CHD7Q9P2D1 MOB1AP1-201ENST00000430903 535 ntBASIC3.59□□□□□ -1.83
CHD7Q9P2D1 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.59□□□□□ -1.83
CHD7Q9P2D1 AC093755.1-201ENST00000512950 1023 ntBASIC3.59□□□□□ -1.83
CHD7Q9P2D1 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.59□□□□□ -1.83
CHD7Q9P2D1 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.59□□□□□ -1.83
CHD7Q9P2D1 NRBF2P5-201ENST00000603087 788 ntBASIC3.59□□□□□ -1.83
CHD7Q9P2D1 AL136360.1-201ENST00000503377 1900 ntBASIC3.59□□□□□ -1.83
CHD7Q9P2D1 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CHD7Q9P2D1 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC3.59□□□□□ -1.83
CHD7Q9P2D1 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CHD7Q9P2D1 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
CHD7Q9P2D1 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CHD7Q9P2D1 SRP72P2-201ENST00000344851 1979 ntBASIC3.59□□□□□ -1.83
CHD7Q9P2D1 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.59□□□□□ -1.84
CHD7Q9P2D1 OR5H2-201ENST00000355273 945 ntBASIC3.59□□□□□ -1.84
CHD7Q9P2D1 AC062016.1-201ENST00000355719 319 ntBASIC3.59□□□□□ -1.84
CHD7Q9P2D1 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
CHD7Q9P2D1 AC006028.1-201ENST00000438379 402 ntBASIC3.59□□□□□ -1.84
CHD7Q9P2D1 ARL4AP3-201ENST00000441452 574 ntBASIC3.59□□□□□ -1.84
CHD7Q9P2D1 AC006480.1-201ENST00000449887 378 ntBASIC3.59□□□□□ -1.84
CHD7Q9P2D1 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.59□□□□□ -1.84
CHD7Q9P2D1 TUG1_1.1-201ENST00000610654 145 ntBASIC3.59□□□□□ -1.84
CHD7Q9P2D1 MIR7154-201ENST00000620673 73 ntBASIC3.59□□□□□ -1.84
CHD7Q9P2D1 MAPK10-286ENST00000641208 8747 ntBASIC3.59□□□□□ -1.84
CHD7Q9P2D1 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC3.59□□□□□ -1.84
CHD7Q9P2D1 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CHD7Q9P2D1 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CHD7Q9P2D1 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CHD7Q9P2D1 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CHD7Q9P2D1 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.58□□□□□ -1.84
CHD7Q9P2D1 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC3.58□□□□□ -1.84
CHD7Q9P2D1 AC108938.1-201ENST00000451204 136 ntBASIC3.58□□□□□ -1.84
CHD7Q9P2D1 AC091826.1-201ENST00000514065 313 ntBASIC3.58□□□□□ -1.84
CHD7Q9P2D1 CYP4A43P-201ENST00000568156 121 ntBASIC3.58□□□□□ -1.84
CHD7Q9P2D1 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.58□□□□□ -1.84
CHD7Q9P2D1 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CHD7Q9P2D1 AC003985.2-201ENST00000562268 1669 ntBASIC3.58□□□□□ -1.84
CHD7Q9P2D1 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CHD7Q9P2D1 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CHD7Q9P2D1 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CHD7Q9P2D1 BTBD10P1-201ENST00000549824 1352 ntBASIC3.58□□□□□ -1.84
CHD7Q9P2D1 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.58□□□□□ -1.84
CHD7Q9P2D1 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CHD7Q9P2D1 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CHD7Q9P2D1 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CHD7Q9P2D1 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CHD7Q9P2D1 RNU4-47P-201ENST00000410876 114 ntBASIC3.58□□□□□ -1.84
CHD7Q9P2D1 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.58□□□□□ -1.84
CHD7Q9P2D1 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CHD7Q9P2D1 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms