Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.81□□□□□ -1.64
PHRF1Q9P1Y6 RNU6-579P-201ENST00000516879 102 ntBASIC4.81□□□□□ -1.64
PHRF1Q9P1Y6 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.81□□□□□ -1.64
PHRF1Q9P1Y6 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PHRF1Q9P1Y6 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.81□□□□□ -1.64
PHRF1Q9P1Y6 Xist_exon4.1-201ENST00000615964 126 ntBASIC4.81□□□□□ -1.64
PHRF1Q9P1Y6 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
PHRF1Q9P1Y6 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PHRF1Q9P1Y6 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PHRF1Q9P1Y6 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
PHRF1Q9P1Y6 RPL23AP57-201ENST00000332361 466 ntBASIC4.8□□□□□ -1.64
PHRF1Q9P1Y6 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PHRF1Q9P1Y6 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PHRF1Q9P1Y6 VN1R51P-201ENST00000411675 945 ntBASIC4.8□□□□□ -1.64
PHRF1Q9P1Y6 DPPA2P2-201ENST00000418220 897 ntBASIC4.8□□□□□ -1.64
PHRF1Q9P1Y6 RPL32P34-201ENST00000486380 400 ntBASIC4.8□□□□□ -1.64
PHRF1Q9P1Y6 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PHRF1Q9P1Y6 AC109458.1-201ENST00000508858 316 ntBASIC4.8□□□□□ -1.64
PHRF1Q9P1Y6 IGHV3-63-201ENST00000518422 341 ntBASIC4.8□□□□□ -1.64
PHRF1Q9P1Y6 AP006245.1-201ENST00000522549 120 ntBASIC4.8□□□□□ -1.64
PHRF1Q9P1Y6 AC005476.1-201ENST00000554427 397 ntBASIC4.8□□□□□ -1.64
PHRF1Q9P1Y6 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.8□□□□□ -1.64
PHRF1Q9P1Y6 AC090337.1-201ENST00000579651 2074 ntBASIC4.8□□□□□ -1.64
PHRF1Q9P1Y6 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.8□□□□□ -1.64
PHRF1Q9P1Y6 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.8□□□□□ -1.64
PHRF1Q9P1Y6 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PHRF1Q9P1Y6 OR10J6P-201ENST00000289731 930 ntBASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 U3.26-201ENST00000391236 204 ntBASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 U3.39-201ENST00000408569 239 ntBASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 RPS4XP2-201ENST00000458402 793 ntBASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 RPL21P6-201ENST00000479171 504 ntBASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 RNA5SP154-201ENST00000516193 111 ntBASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 RN7SKP209-201ENST00000516888 304 ntBASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 AL133457.1-201ENST00000564251 987 ntBASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 MIR4276-201ENST00000584832 70 ntBASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 MRPS35P3-201ENST00000603189 709 ntBASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 AL049840.6-202ENST00000603373 279 ntBASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 AC135507.2-201ENST00000612443 309 ntBASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 AC026422.1-201ENST00000623961 452 ntBASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 AC091905.1-201ENST00000624400 311 ntBASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 AL357075.1-201ENST00000404107 726 ntBASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 HIGD1AP12-201ENST00000427832 281 ntBASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 AC092809.1-201ENST00000441469 474 ntBASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 AC025445.1-201ENST00000502728 300 ntBASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 PTGES3P3-201ENST00000511479 482 ntBASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 AC107294.1-201ENST00000609524 467 ntBASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 AL669942.2-201ENST00000620352 697 ntBASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PHRF1Q9P1Y6 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PHRF1Q9P1Y6 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.78□□□□□ -1.64
PHRF1Q9P1Y6 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PHRF1Q9P1Y6 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PHRF1Q9P1Y6 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PHRF1Q9P1Y6 Z95331.1-201ENST00000623075 23112 ntBASIC4.78□□□□□ -1.64
PHRF1Q9P1Y6 AC027290.2-201ENST00000623210 18662 ntBASIC4.78□□□□□ -1.64
PHRF1Q9P1Y6 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PHRF1Q9P1Y6 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PHRF1Q9P1Y6 BX323014.1-201ENST00000412876 237 ntBASIC4.78□□□□□ -1.64
PHRF1Q9P1Y6 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PHRF1Q9P1Y6 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.78□□□□□ -1.64
PHRF1Q9P1Y6 MIR5680-201ENST00000577577 84 ntBASIC4.78□□□□□ -1.64
PHRF1Q9P1Y6 AL606834.2-201ENST00000602954 668 ntBASIC4.78□□□□□ -1.64
PHRF1Q9P1Y6 AL157762.1-201ENST00000619612 415 ntBASIC4.78□□□□□ -1.64
PHRF1Q9P1Y6 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
PHRF1Q9P1Y6 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PHRF1Q9P1Y6 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PHRF1Q9P1Y6 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PHRF1Q9P1Y6 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 AJ239321.1-201ENST00000424255 564 ntBASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 USP9YP36-201ENST00000424581 829 ntBASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 MOB1AP1-201ENST00000430903 535 ntBASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 USP9YP31-201ENST00000431405 881 ntBASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 YWHAQP9-201ENST00000445891 512 ntBASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 AC073522.1-201ENST00000483312 377 ntBASIC4.77□□□□□ -1.65
PHRF1Q9P1Y6 AC012123.2-201ENST00000485809 248 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms