Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC010680.3-201ENST00000604215 520 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 AL354984.3-201ENST00000604803 325 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 OR6R2P-201ENST00000609216 300 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 AL512427.1-201ENST00000618593 349 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 AC109454.4-201ENST00000623411 649 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 AL356118.1-201ENST00000635272 1078 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 MIR4496-201ENST00000635896 61 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 AC009452.1-201ENST00000640823 606 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 MTND5P28-201ENST00000438005 1594 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 MTND4P8-201ENST00000514997 1362 ntBASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
BLOC1S4Q9NUP1 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 AC017104.4-201ENST00000636283 1592 ntBASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 RNU6-1279P-201ENST00000383917 103 ntBASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 RNU2-21P-201ENST00000410368 188 ntBASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 AC004987.3-201ENST00000413879 771 ntBASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 RPS15AP40-201ENST00000419621 391 ntBASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 AL732292.1-201ENST00000426692 226 ntBASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 RNF2P1-201ENST00000442955 1010 ntBASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 NDUFA12P1-201ENST00000455914 406 ntBASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 RPL35AP15-201ENST00000468042 339 ntBASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 AP000893.1-201ENST00000474462 794 ntBASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 RN7SL41P-201ENST00000476144 297 ntBASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 RN7SL459P-201ENST00000481078 302 ntBASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 AC012158.1-204ENST00000483430 465 ntBASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 AC091860.1-201ENST00000505723 432 ntBASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 RN7SKP234-201ENST00000517173 224 ntBASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 AC004217.3-201ENST00000551552 878 ntBASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 MIR4330-201ENST00000579077 105 ntBASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 FP325313.1-201ENST00000638228 703 ntBASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
BLOC1S4Q9NUP1 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 RNU6-444P-201ENST00000383988 108 ntBASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 SNORD66.1-201ENST00000391230 76 ntBASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 FABP12P1-201ENST00000401911 322 ntBASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 HDGFP1-201ENST00000405943 252 ntBASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 VN1R8P-201ENST00000407739 893 ntBASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 AC092638.1-201ENST00000411966 1275 ntBASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 AC008280.1-201ENST00000418851 412 ntBASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 AC079804.1-201ENST00000461922 436 ntBASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 KRT19P6-201ENST00000510983 209 ntBASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 IGLVIV-65-201ENST00000517313 360 ntBASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 AC008694.2-201ENST00000517591 306 ntBASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 DEFB109D-201ENST00000529497 240 ntBASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 OR8K4P-201ENST00000534608 872 ntBASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 TRAV8-5-201ENST00000537369 341 ntBASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 AP001180.3-201ENST00000582221 145 ntBASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 AC090948.1-201ENST00000607464 549 ntBASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 AL138721.1-201ENST00000616756 179 ntBASIC4.87□□□□□ -1.63
BLOC1S4Q9NUP1 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms