Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 RNU1-128P-201ENST00000516704 160 ntBASIC4.66□□□□□ -1.66
SALL1Q9NSC2 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.66□□□□□ -1.66
SALL1Q9NSC2 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.66□□□□□ -1.66
SALL1Q9NSC2 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.66□□□□□ -1.66
SALL1Q9NSC2 GNRHR2P1-201ENST00000555315 631 ntBASIC4.66□□□□□ -1.66
SALL1Q9NSC2 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.66□□□□□ -1.66
SALL1Q9NSC2 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.66□□□□□ -1.66
SALL1Q9NSC2 RNU1-30P-201ENST00000606575 163 ntBASIC4.66□□□□□ -1.66
SALL1Q9NSC2 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.66□□□□□ -1.66
SALL1Q9NSC2 AP003499.2-201ENST00000624100 483 ntBASIC4.66□□□□□ -1.66
SALL1Q9NSC2 AC091948.2-201ENST00000636510 279 ntBASIC4.66□□□□□ -1.66
SALL1Q9NSC2 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SALL1Q9NSC2 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.66□□□□□ -1.66
SALL1Q9NSC2 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.65□□□□□ -1.66
SALL1Q9NSC2 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SALL1Q9NSC2 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SALL1Q9NSC2 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SALL1Q9NSC2 ZNF285B-201ENST00000561698 1767 ntBASIC4.65□□□□□ -1.66
SALL1Q9NSC2 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SALL1Q9NSC2 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SALL1Q9NSC2 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SALL1Q9NSC2 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.65□□□□□ -1.67
SALL1Q9NSC2 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
SALL1Q9NSC2 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SALL1Q9NSC2 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.65□□□□□ -1.67
SALL1Q9NSC2 SNORA5A-201ENST00000384111 134 ntBASIC4.65□□□□□ -1.67
SALL1Q9NSC2 RNU6-883P-201ENST00000384597 107 ntBASIC4.65□□□□□ -1.67
SALL1Q9NSC2 MIR200C-201ENST00000384980 68 ntBASIC4.65□□□□□ -1.67
SALL1Q9NSC2 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SALL1Q9NSC2 AL139247.1-201ENST00000422768 325 ntBASIC4.65□□□□□ -1.67
SALL1Q9NSC2 CR848007.2-201ENST00000424918 787 ntBASIC4.65□□□□□ -1.67
SALL1Q9NSC2 YWHAEP5-201ENST00000431545 765 ntBASIC4.65□□□□□ -1.67
SALL1Q9NSC2 AL050321.1-201ENST00000432363 400 ntBASIC4.65□□□□□ -1.67
SALL1Q9NSC2 VN1R25P-201ENST00000443385 738 ntBASIC4.65□□□□□ -1.67
SALL1Q9NSC2 RPS17P13-201ENST00000448974 407 ntBASIC4.65□□□□□ -1.67
SALL1Q9NSC2 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.65□□□□□ -1.67
SALL1Q9NSC2 VN1R40P-201ENST00000455196 941 ntBASIC4.65□□□□□ -1.67
SALL1Q9NSC2 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.65□□□□□ -1.67
SALL1Q9NSC2 AL133244.1-201ENST00000456007 258 ntBASIC4.65□□□□□ -1.67
SALL1Q9NSC2 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.65□□□□□ -1.67
SALL1Q9NSC2 HAUS1P1-201ENST00000505275 832 ntBASIC4.65□□□□□ -1.67
SALL1Q9NSC2 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.65□□□□□ -1.67
SALL1Q9NSC2 AC008802.1-201ENST00000519121 791 ntBASIC4.65□□□□□ -1.67
SALL1Q9NSC2 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.65□□□□□ -1.67
SALL1Q9NSC2 OR4A12P-201ENST00000530847 918 ntBASIC4.65□□□□□ -1.67
SALL1Q9NSC2 CCNG2P1-201ENST00000549521 1000 ntBASIC4.65□□□□□ -1.67
SALL1Q9NSC2 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.65□□□□□ -1.67
SALL1Q9NSC2 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.65□□□□□ -1.67
SALL1Q9NSC2 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.65□□□□□ -1.67
SALL1Q9NSC2 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.65□□□□□ -1.67
SALL1Q9NSC2 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.65□□□□□ -1.67
SALL1Q9NSC2 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.65□□□□□ -1.67
SALL1Q9NSC2 AC096553.1-201ENST00000605169 829 ntBASIC4.65□□□□□ -1.67
SALL1Q9NSC2 AC005972.3-201ENST00000606304 481 ntBASIC4.65□□□□□ -1.67
SALL1Q9NSC2 AC084036.1-201ENST00000609190 508 ntBASIC4.65□□□□□ -1.67
SALL1Q9NSC2 AP000255.1-201ENST00000610276 676 ntBASIC4.65□□□□□ -1.67
SALL1Q9NSC2 AC004777.1-201ENST00000624317 287 ntBASIC4.65□□□□□ -1.67
SALL1Q9NSC2 HPVC1-201ENST00000629899 1198 ntBASIC4.65□□□□□ -1.67
SALL1Q9NSC2 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.65□□□□□ -1.67
SALL1Q9NSC2 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.65□□□□□ -1.67
SALL1Q9NSC2 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SALL1Q9NSC2 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.65□□□□□ -1.67
SALL1Q9NSC2 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SALL1Q9NSC2 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.64□□□□□ -1.67
SALL1Q9NSC2 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.64□□□□□ -1.67
SALL1Q9NSC2 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SALL1Q9NSC2 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SALL1Q9NSC2 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SALL1Q9NSC2 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SALL1Q9NSC2 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.64□□□□□ -1.67
SALL1Q9NSC2 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.64□□□□□ -1.67
SALL1Q9NSC2 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SALL1Q9NSC2 MIR365B-201ENST00000362317 111 ntBASIC4.64□□□□□ -1.67
SALL1Q9NSC2 Y_RNA.333-201ENST00000365274 102 ntBASIC4.64□□□□□ -1.67
SALL1Q9NSC2 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.64□□□□□ -1.67
SALL1Q9NSC2 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SALL1Q9NSC2 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.64□□□□□ -1.67
SALL1Q9NSC2 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.64□□□□□ -1.67
SALL1Q9NSC2 RPL21P17-201ENST00000397467 475 ntBASIC4.64□□□□□ -1.67
SALL1Q9NSC2 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SALL1Q9NSC2 LAP3P1-201ENST00000403648 294 ntBASIC4.64□□□□□ -1.67
SALL1Q9NSC2 USP9YP19-201ENST00000412165 485 ntBASIC4.64□□□□□ -1.67
SALL1Q9NSC2 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.64□□□□□ -1.67
SALL1Q9NSC2 AC019070.1-201ENST00000415008 1024 ntBASIC4.64□□□□□ -1.67
SALL1Q9NSC2 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.64□□□□□ -1.67
SALL1Q9NSC2 AL356806.1-201ENST00000422524 916 ntBASIC4.64□□□□□ -1.67
SALL1Q9NSC2 MTND2P11-201ENST00000423638 648 ntBASIC4.64□□□□□ -1.67
SALL1Q9NSC2 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.64□□□□□ -1.67
SALL1Q9NSC2 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SALL1Q9NSC2 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.64□□□□□ -1.67
SALL1Q9NSC2 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.64□□□□□ -1.67
SALL1Q9NSC2 COL6A4P2-205ENST00000509855 506 ntBASIC4.64□□□□□ -1.67
SALL1Q9NSC2 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.64□□□□□ -1.67
SALL1Q9NSC2 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.64□□□□□ -1.67
SALL1Q9NSC2 MIR4298-201ENST00000584380 73 ntBASIC4.64□□□□□ -1.67
SALL1Q9NSC2 AC004241.3-201ENST00000611728 517 ntBASIC4.64□□□□□ -1.67
SALL1Q9NSC2 AC005858.4-201ENST00000623191 700 ntBASIC4.64□□□□□ -1.67
SALL1Q9NSC2 AP002967.1-201ENST00000624203 539 ntBASIC4.64□□□□□ -1.67
SALL1Q9NSC2 UBE3AP2-201ENST00000429033 2259 ntBASIC4.64□□□□□ -1.67
SALL1Q9NSC2 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms