Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AL590365.1-201ENST00000450788 243 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 PMCHL2-203ENST00000457791 237 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 NPM1P21-201ENST00000513394 762 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 Y_RNA.675-201ENST00000516389 149 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 AC013828.2-201ENST00000532487 235 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 AC126615.2-201ENST00000553003 515 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 SNORD39.2-201ENST00000579995 76 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 MIR3614-201ENST00000581261 86 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 COX6CP7-201ENST00000597056 208 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 AC243756.2-201ENST00000618406 463 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 AC231657.1-201ENST00000624313 397 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 AC114774.1-201ENST00000507410 1770 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 AC009962.1-201ENST00000567327 3813 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 UGT2B26P-201ENST00000508672 1613 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 AP001284.1-201ENST00000528393 2118 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 MT-RNR2-201ENST00000387347 1559 ntBASIC5.08□□□□□ -1.6
SEC61A2Q9H9S3 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 RNU6-462P-201ENST00000362659 105 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 RNY4P34-201ENST00000364779 95 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 RN7SKP69-201ENST00000365390 305 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 RNU6-877P-201ENST00000383868 107 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 RNU6-533P-201ENST00000384144 107 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 MIR320B1-201ENST00000390209 79 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 AC087752.1-201ENST00000391360 558 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 RNU6-195P-201ENST00000411352 109 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 RPS3AP9-201ENST00000417027 792 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 AL953862.1-201ENST00000423016 168 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 AC127526.2-201ENST00000426436 775 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 HMGN2P27-201ENST00000427352 270 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 AC073335.1-201ENST00000427776 363 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 MTND6P12-201ENST00000428247 522 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 TIMM9P3-201ENST00000428659 274 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 RPL7P11-201ENST00000437586 658 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 SUMO2P3-201ENST00000438311 288 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 AC092809.1-201ENST00000441469 474 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 RPS20P24-201ENST00000457473 361 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 AC007998.1-201ENST00000474156 672 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 RPS26P24-201ENST00000497656 331 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 AC074255.1-201ENST00000511259 501 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 SAP18P1-201ENST00000512058 390 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 SCARNA6.1-201ENST00000516989 238 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 AC139365.2-201ENST00000517972 253 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 DEFB131D-201ENST00000526803 184 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 HMGN2P36-201ENST00000529541 409 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 AP000648.1-201ENST00000529682 397 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 AC022878.1-201ENST00000530684 149 ntBASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.07□□□□□ -1.6
SEC61A2Q9H9S3 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms