Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
PHOX2BQ99453 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
PHOX2BQ99453 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC7.09□□□□□ -1.27
PHOX2BQ99453 EFTUD1P2-201ENST00000514817 1603 ntBASIC7.09□□□□□ -1.27
PHOX2BQ99453 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
PHOX2BQ99453 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
PHOX2BQ99453 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PHOX2BQ99453 AC109780.1-201ENST00000451768 1344 ntBASIC7.09□□□□□ -1.27
PHOX2BQ99453 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
PHOX2BQ99453 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
PHOX2BQ99453 AC011978.2-201ENST00000569835 2054 ntBASIC7.09□□□□□ -1.27
PHOX2BQ99453 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PHOX2BQ99453 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PHOX2BQ99453 Y_RNA.153-201ENST00000363615 91 ntBASIC7.09□□□□□ -1.27
PHOX2BQ99453 Y_RNA.389-201ENST00000383924 113 ntBASIC7.09□□□□□ -1.27
PHOX2BQ99453 Y_RNA.493-201ENST00000384422 102 ntBASIC7.09□□□□□ -1.27
PHOX2BQ99453 SNORA17A-201ENST00000391185 133 ntBASIC7.09□□□□□ -1.27
PHOX2BQ99453 RNU6-1109P-201ENST00000391187 107 ntBASIC7.09□□□□□ -1.27
PHOX2BQ99453 MIR548I3-201ENST00000408378 149 ntBASIC7.09□□□□□ -1.27
PHOX2BQ99453 MIR548I1-201ENST00000408810 149 ntBASIC7.09□□□□□ -1.27
PHOX2BQ99453 RNU6-101P-201ENST00000410323 104 ntBASIC7.09□□□□□ -1.27
PHOX2BQ99453 AC008267.5-201ENST00000424928 265 ntBASIC7.09□□□□□ -1.27
PHOX2BQ99453 AC092651.1-201ENST00000426110 312 ntBASIC7.09□□□□□ -1.27
PHOX2BQ99453 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.09□□□□□ -1.27
PHOX2BQ99453 SNORD97-201ENST00000459187 142 ntBASIC7.09□□□□□ -1.27
PHOX2BQ99453 RN7SL332P-201ENST00000482163 254 ntBASIC7.09□□□□□ -1.27
PHOX2BQ99453 AC104806.1-201ENST00000508720 308 ntBASIC7.09□□□□□ -1.27
PHOX2BQ99453 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.09□□□□□ -1.27
PHOX2BQ99453 RNU6-475P-201ENST00000516073 104 ntBASIC7.09□□□□□ -1.27
PHOX2BQ99453 SNORD116.3-201ENST00000517176 78 ntBASIC7.09□□□□□ -1.27
PHOX2BQ99453 RNU1-54P-201ENST00000517181 120 ntBASIC7.09□□□□□ -1.27
PHOX2BQ99453 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC7.09□□□□□ -1.27
PHOX2BQ99453 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.09□□□□□ -1.27
PHOX2BQ99453 CARD16-203ENST00000525374 503 ntTSL 3 BASIC7.09□□□□□ -1.27
PHOX2BQ99453 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC7.09□□□□□ -1.27
PHOX2BQ99453 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC7.09□□□□□ -1.27
PHOX2BQ99453 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PHOX2BQ99453 AC124916.2-201ENST00000604416 224 ntBASIC7.09□□□□□ -1.27
PHOX2BQ99453 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.09□□□□□ -1.27
PHOX2BQ99453 AL355365.1-201ENST00000616480 294 ntBASIC7.09□□□□□ -1.27
PHOX2BQ99453 AC243312.2-201ENST00000623340 601 ntBASIC7.09□□□□□ -1.27
PHOX2BQ99453 SNORA17.5-201ENST00000630429 132 ntBASIC7.09□□□□□ -1.27
PHOX2BQ99453 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.09□□□□□ -1.27
PHOX2BQ99453 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC7.09□□□□□ -1.27
PHOX2BQ99453 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PHOX2BQ99453 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
PHOX2BQ99453 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PHOX2BQ99453 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
PHOX2BQ99453 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
PHOX2BQ99453 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC7.09□□□□□ -1.27
PHOX2BQ99453 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC7.09□□□□□ -1.27
PHOX2BQ99453 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
PHOX2BQ99453 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.09□□□□□ -1.27
PHOX2BQ99453 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PHOX2BQ99453 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
PHOX2BQ99453 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC7.09□□□□□ -1.28
PHOX2BQ99453 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.09□□□□□ -1.28
PHOX2BQ99453 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
PHOX2BQ99453 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.28
PHOX2BQ99453 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
PHOX2BQ99453 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
PHOX2BQ99453 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
PHOX2BQ99453 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
PHOX2BQ99453 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PHOX2BQ99453 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PHOX2BQ99453 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PHOX2BQ99453 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
PHOX2BQ99453 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PHOX2BQ99453 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PHOX2BQ99453 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PHOX2BQ99453 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.08□□□□□ -1.28
PHOX2BQ99453 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PHOX2BQ99453 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PHOX2BQ99453 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.08□□□□□ -1.28
PHOX2BQ99453 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PHOX2BQ99453 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.08□□□□□ -1.28
PHOX2BQ99453 RNA5SP510-201ENST00000364697 99 ntBASIC7.08□□□□□ -1.28
PHOX2BQ99453 Y_RNA.307-201ENST00000365022 117 ntBASIC7.08□□□□□ -1.28
PHOX2BQ99453 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC7.08□□□□□ -1.28
PHOX2BQ99453 RNU6ATAC23P-201ENST00000408448 123 ntBASIC7.08□□□□□ -1.28
PHOX2BQ99453 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PHOX2BQ99453 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC7.08□□□□□ -1.28
PHOX2BQ99453 AL139095.3-201ENST00000419672 1203 ntBASIC7.08□□□□□ -1.28
PHOX2BQ99453 RSL24D1P6-201ENST00000426934 401 ntBASIC7.08□□□□□ -1.28
PHOX2BQ99453 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC7.08□□□□□ -1.28
PHOX2BQ99453 AC108479.1-201ENST00000431142 427 ntBASIC7.08□□□□□ -1.28
PHOX2BQ99453 ANKRD54P1-201ENST00000433115 471 ntBASIC7.08□□□□□ -1.28
PHOX2BQ99453 AC005040.1-201ENST00000437783 482 ntBASIC7.08□□□□□ -1.28
PHOX2BQ99453 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC7.08□□□□□ -1.28
PHOX2BQ99453 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC7.08□□□□□ -1.28
PHOX2BQ99453 RN7SL390P-201ENST00000470634 284 ntBASIC7.08□□□□□ -1.28
PHOX2BQ99453 RPL22P13-201ENST00000493291 347 ntBASIC7.08□□□□□ -1.28
PHOX2BQ99453 RNU6-470P-201ENST00000515954 104 ntBASIC7.08□□□□□ -1.28
PHOX2BQ99453 RNU6-307P-201ENST00000516743 106 ntBASIC7.08□□□□□ -1.28
PHOX2BQ99453 IGLV1-62-201ENST00000518003 441 ntBASIC7.08□□□□□ -1.28
PHOX2BQ99453 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC7.08□□□□□ -1.28
PHOX2BQ99453 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.08□□□□□ -1.28
PHOX2BQ99453 AC106782.4-201ENST00000568264 210 ntBASIC7.08□□□□□ -1.28
PHOX2BQ99453 MIR3941-201ENST00000582572 103 ntBASIC7.08□□□□□ -1.28
PHOX2BQ99453 SMIM12P1-201ENST00000603004 274 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms