Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 OR7E13P-201ENST00000526052 910 ntBASIC5.21□□□□□ -1.58
CCDC7Q96M83 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC7Q96M83 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.21□□□□□ -1.58
CCDC7Q96M83 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC7Q96M83 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC7Q96M83 BRDTP1-201ENST00000605735 677 ntBASIC5.21□□□□□ -1.58
CCDC7Q96M83 AL354760.1-201ENST00000608357 643 ntBASIC5.21□□□□□ -1.58
CCDC7Q96M83 FAM35DP-201ENST00000323387 2712 ntBASIC5.21□□□□□ -1.58
CCDC7Q96M83 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC7Q96M83 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC7Q96M83 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC7Q96M83 CUL4AP1-201ENST00000514750 1863 ntBASIC5.21□□□□□ -1.58
CCDC7Q96M83 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC7Q96M83 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC7Q96M83 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC7Q96M83 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC7Q96M83 RPL7P60-201ENST00000397636 735 ntBASIC5.2□□□□□ -1.58
CCDC7Q96M83 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.2□□□□□ -1.58
CCDC7Q96M83 AL691447.1-201ENST00000419456 387 ntBASIC5.2□□□□□ -1.58
CCDC7Q96M83 TCEA1P2-201ENST00000420496 906 ntBASIC5.2□□□□□ -1.58
CCDC7Q96M83 HIGD1AP12-201ENST00000427832 281 ntBASIC5.2□□□□□ -1.58
CCDC7Q96M83 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC7Q96M83 AC104978.1-201ENST00000449387 391 ntBASIC5.2□□□□□ -1.58
CCDC7Q96M83 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC7Q96M83 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
CCDC7Q96M83 CDH12P2-201ENST00000504393 298 ntBASIC5.2□□□□□ -1.58
CCDC7Q96M83 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC7Q96M83 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC7Q96M83 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC7Q96M83 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC7Q96M83 OR8I1P-201ENST00000529291 931 ntBASIC5.2□□□□□ -1.58
CCDC7Q96M83 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC7Q96M83 AC008011.1-201ENST00000545989 227 ntBASIC5.2□□□□□ -1.58
CCDC7Q96M83 AC093014.1-201ENST00000548926 724 ntBASIC5.2□□□□□ -1.58
CCDC7Q96M83 AC084033.1-201ENST00000550830 633 ntBASIC5.2□□□□□ -1.58
CCDC7Q96M83 ZNF415P1-201ENST00000582279 1166 ntBASIC5.2□□□□□ -1.58
CCDC7Q96M83 MIR5187-201ENST00000583479 76 ntBASIC5.2□□□□□ -1.58
CCDC7Q96M83 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC7Q96M83 AL122125.1-201ENST00000616999 600 ntBASIC5.2□□□□□ -1.58
CCDC7Q96M83 MIR7975-201ENST00000619350 68 ntBASIC5.2□□□□□ -1.58
CCDC7Q96M83 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC7Q96M83 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC7Q96M83 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC7Q96M83 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC7Q96M83 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC7Q96M83 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC7Q96M83 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC7Q96M83 MTCO1P22-201ENST00000604619 1360 ntBASIC5.19□□□□□ -1.58
CCDC7Q96M83 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC7Q96M83 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC7Q96M83 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC7Q96M83 HSPD1P21-201ENST00000436541 245 ntBASIC5.19□□□□□ -1.58
CCDC7Q96M83 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC7Q96M83 AC007967.1-201ENST00000455422 1159 ntBASIC5.19□□□□□ -1.58
CCDC7Q96M83 MTCYBP14-201ENST00000457471 715 ntBASIC5.19□□□□□ -1.58
CCDC7Q96M83 AC106707.2-201ENST00000484182 374 ntBASIC5.19□□□□□ -1.58
CCDC7Q96M83 UBA52P3-201ENST00000491303 382 ntBASIC5.19□□□□□ -1.58
CCDC7Q96M83 WBP1LP4-201ENST00000505043 344 ntBASIC5.19□□□□□ -1.58
CCDC7Q96M83 HMGN1P11-201ENST00000508668 303 ntBASIC5.19□□□□□ -1.58
CCDC7Q96M83 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC7Q96M83 AC104619.4-201ENST00000510773 249 ntBASIC5.19□□□□□ -1.58
CCDC7Q96M83 AC074250.1-201ENST00000511117 192 ntBASIC5.19□□□□□ -1.58
CCDC7Q96M83 RNA5SP164-201ENST00000516533 110 ntBASIC5.19□□□□□ -1.58
CCDC7Q96M83 RN7SKP209-201ENST00000516888 304 ntBASIC5.19□□□□□ -1.58
CCDC7Q96M83 AC008489.1-201ENST00000524271 483 ntBASIC5.19□□□□□ -1.58
CCDC7Q96M83 AC025857.1-201ENST00000525252 377 ntBASIC5.19□□□□□ -1.58
CCDC7Q96M83 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC7Q96M83 AC107016.1-201ENST00000550463 337 ntBASIC5.19□□□□□ -1.58
CCDC7Q96M83 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.19□□□□□ -1.58
CCDC7Q96M83 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC7Q96M83 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC7Q96M83 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC7Q96M83 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC7Q96M83 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC7Q96M83 THAP12P8-201ENST00000447914 2115 ntBASIC5.19□□□□□ -1.58
CCDC7Q96M83 MTND5P1-201ENST00000445440 1375 ntBASIC5.18□□□□□ -1.58
CCDC7Q96M83 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC7Q96M83 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CCDC7Q96M83 RNA5SP424-201ENST00000390988 115 ntBASIC5.18□□□□□ -1.58
CCDC7Q96M83 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC7Q96M83 HSPE1P8-201ENST00000406997 288 ntBASIC5.18□□□□□ -1.58
CCDC7Q96M83 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC7Q96M83 AL159987.2-201ENST00000432754 307 ntBASIC5.18□□□□□ -1.58
CCDC7Q96M83 AL645931.1-201ENST00000439737 410 ntBASIC5.18□□□□□ -1.58
CCDC7Q96M83 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC7Q96M83 RN7SL293P-201ENST00000481765 281 ntBASIC5.18□□□□□ -1.58
CCDC7Q96M83 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC7Q96M83 RFPL4AP3-201ENST00000515267 345 ntBASIC5.18□□□□□ -1.58
CCDC7Q96M83 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC7Q96M83 AL442067.2-201ENST00000614033 363 ntBASIC5.18□□□□□ -1.58
CCDC7Q96M83 AL158196.1-201ENST00000616786 434 ntBASIC5.18□□□□□ -1.58
CCDC7Q96M83 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CCDC7Q96M83 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
CCDC7Q96M83 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
CCDC7Q96M83 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC7Q96M83 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC7Q96M83 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
CCDC7Q96M83 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC7Q96M83 SNORD3H-201ENST00000384486 214 ntBASIC5.17□□□□□ -1.58
CCDC7Q96M83 AC245052.5-201ENST00000416320 649 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms