Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 AL390816.3-201ENST00000604527 1066 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 VIS1.1-201ENST00000610517 203 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 MIR7155-201ENST00000615925 56 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 AC121761.2-201ENST00000617300 689 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 AC090510.2-201ENST00000617465 629 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 MIR6719-201ENST00000622428 87 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 AL359922.3-201ENST00000624779 1670 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 AC000374.1-201ENST00000434698 1745 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 LINC01355-201ENST00000566551 5444 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 IRF5P1-201ENST00000504852 2164 ntBASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.42□□□□□ -1.54
CDK5RAP3Q96JB5 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 SNORA74A-201ENST00000364089 198 ntBASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 E2F6P2-201ENST00000420708 748 ntBASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 AC011233.1-201ENST00000422812 283 ntBASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 EIF4HP2-201ENST00000424380 563 ntBASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 MTND3P1-201ENST00000441336 220 ntBASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 AC010683.1-201ENST00000473673 378 ntBASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 RN7SL346P-201ENST00000491561 294 ntBASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 TCP11X3P-202ENST00000514289 1254 ntBASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 RNA5SP392-201ENST00000516905 112 ntBASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 AC087808.1-201ENST00000520501 361 ntBASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 AC087373.1-201ENST00000524920 491 ntBASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 OR5AZ1P-201ENST00000527448 943 ntBASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 AC021006.3-201ENST00000530771 192 ntBASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 AC008033.2-201ENST00000542626 177 ntBASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 AC133555.2-201ENST00000550213 292 ntBASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 AC087477.6-201ENST00000559595 843 ntBASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 AL158042.1-201ENST00000605338 460 ntBASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 AL451074.6-201ENST00000608512 729 ntBASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 AC007497.1-201ENST00000610421 561 ntBASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 OR8B1P-202ENST00000641132 1178 ntBASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 CASC19-222ENST00000641321 1173 ntBASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 AL031119.1-201ENST00000404707 1879 ntBASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.41□□□□□ -1.54
CDK5RAP3Q96JB5 TLK1P1-201ENST00000456760 2440 ntBASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 AL022393.1-201ENST00000625142 1677 ntBASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 FAM3C2-201ENST00000312214 681 ntBASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 SNORA51.8-201ENST00000384234 132 ntBASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 TAF9BP1-201ENST00000396646 746 ntBASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 RNU6-757P-201ENST00000410334 100 ntBASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 LINC00993-201ENST00000420453 540 ntBASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 AL358176.3-201ENST00000420757 454 ntBASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 AL139421.1-201ENST00000423010 169 ntBASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 CKS1BP6-201ENST00000424932 240 ntBASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 AC004938.1-201ENST00000438468 308 ntBASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 OR52J1P-201ENST00000450596 932 ntBASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 AC010733.1-201ENST00000451515 401 ntBASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 AC010468.1-201ENST00000461022 817 ntBASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 RN7SL329P-201ENST00000467740 299 ntBASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.4□□□□□ -1.54
CDK5RAP3Q96JB5 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms