Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 AL132838.2-201ENST00000492041 314 ntBASIC3.83□□□□□ -1.8
UBE2E3Q969T4 RN7SKP122-201ENST00000515923 296 ntBASIC3.83□□□□□ -1.8
UBE2E3Q969T4 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.83□□□□□ -1.8
UBE2E3Q969T4 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.83□□□□□ -1.8
UBE2E3Q969T4 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.83□□□□□ -1.8
UBE2E3Q969T4 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.83□□□□□ -1.8
UBE2E3Q969T4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.83□□□□□ -1.8
UBE2E3Q969T4 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.83□□□□□ -1.8
UBE2E3Q969T4 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.83□□□□□ -1.8
UBE2E3Q969T4 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.83□□□□□ -1.8
UBE2E3Q969T4 AC004775.1-201ENST00000607389 753 ntBASIC3.83□□□□□ -1.8
UBE2E3Q969T4 AC112484.5-201ENST00000624189 228 ntBASIC3.83□□□□□ -1.8
UBE2E3Q969T4 MIR6830-201ENST00000636015 70 ntBASIC3.83□□□□□ -1.8
UBE2E3Q969T4 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
UBE2E3Q969T4 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
UBE2E3Q969T4 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
UBE2E3Q969T4 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
UBE2E3Q969T4 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
UBE2E3Q969T4 BDP1P-201ENST00000582658 1990 ntBASIC3.83□□□□□ -1.8
UBE2E3Q969T4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
UBE2E3Q969T4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
UBE2E3Q969T4 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
UBE2E3Q969T4 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
UBE2E3Q969T4 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.82□□□□□ -1.8
UBE2E3Q969T4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
UBE2E3Q969T4 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.82□□□□□ -1.8
UBE2E3Q969T4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
UBE2E3Q969T4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
UBE2E3Q969T4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBE2E3Q969T4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBE2E3Q969T4 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBE2E3Q969T4 KPNA2P2-201ENST00000419546 1489 ntBASIC3.82□□□□□ -1.8
UBE2E3Q969T4 AP002001.2-201ENST00000529025 1469 ntBASIC3.82□□□□□ -1.8
UBE2E3Q969T4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBE2E3Q969T4 RNU2-17P-201ENST00000410290 190 ntBASIC3.82□□□□□ -1.8
UBE2E3Q969T4 TCEA1P4-201ENST00000415066 844 ntBASIC3.82□□□□□ -1.8
UBE2E3Q969T4 LINC01347-201ENST00000417964 355 ntBASIC3.82□□□□□ -1.8
UBE2E3Q969T4 AC004690.1-201ENST00000418216 328 ntBASIC3.82□□□□□ -1.8
UBE2E3Q969T4 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.82□□□□□ -1.8
UBE2E3Q969T4 ELOCP11-201ENST00000436690 332 ntBASIC3.82□□□□□ -1.8
UBE2E3Q969T4 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.82□□□□□ -1.8
UBE2E3Q969T4 AC007000.2-201ENST00000442564 487 ntBASIC3.82□□□□□ -1.8
UBE2E3Q969T4 ELOCP16-201ENST00000444494 332 ntBASIC3.82□□□□□ -1.8
UBE2E3Q969T4 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.82□□□□□ -1.8
UBE2E3Q969T4 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.82□□□□□ -1.8
UBE2E3Q969T4 RPL7P19-201ENST00000469948 618 ntBASIC3.82□□□□□ -1.8
UBE2E3Q969T4 AC110792.1-201ENST00000491826 472 ntBASIC3.82□□□□□ -1.8
UBE2E3Q969T4 HPRT1P1-201ENST00000509498 657 ntBASIC3.82□□□□□ -1.8
UBE2E3Q969T4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.82□□□□□ -1.8
UBE2E3Q969T4 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
UBE2E3Q969T4 AC025884.1-201ENST00000556034 378 ntBASIC3.82□□□□□ -1.8
UBE2E3Q969T4 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.82□□□□□ -1.8
UBE2E3Q969T4 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.82□□□□□ -1.8
UBE2E3Q969T4 ABI1P1-201ENST00000603375 1120 ntBASIC3.82□□□□□ -1.8
UBE2E3Q969T4 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.82□□□□□ -1.8
UBE2E3Q969T4 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.82□□□□□ -1.8
UBE2E3Q969T4 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
UBE2E3Q969T4 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBE2E3Q969T4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
UBE2E3Q969T4 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
UBE2E3Q969T4 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBE2E3Q969T4 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.82□□□□□ -1.8
UBE2E3Q969T4 UBE3AP2-201ENST00000429033 2259 ntBASIC3.81□□□□□ -1.8
UBE2E3Q969T4 OR52B1P-201ENST00000316506 909 ntBASIC3.81□□□□□ -1.8
UBE2E3Q969T4 RNA5SP130-201ENST00000364431 114 ntBASIC3.81□□□□□ -1.8
UBE2E3Q969T4 SNORA62-201ENST00000365493 153 ntBASIC3.81□□□□□ -1.8
UBE2E3Q969T4 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
UBE2E3Q969T4 HMGB1P10-201ENST00000395823 563 ntBASIC3.81□□□□□ -1.8
UBE2E3Q969T4 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.81□□□□□ -1.8
UBE2E3Q969T4 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.81□□□□□ -1.8
UBE2E3Q969T4 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.81□□□□□ -1.8
UBE2E3Q969T4 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.81□□□□□ -1.8
UBE2E3Q969T4 AC083863.1-201ENST00000438811 231 ntBASIC3.81□□□□□ -1.8
UBE2E3Q969T4 AC097499.1-201ENST00000444277 208 ntBASIC3.81□□□□□ -1.8
UBE2E3Q969T4 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.81□□□□□ -1.8
UBE2E3Q969T4 AL451050.1-201ENST00000450126 415 ntBASIC3.81□□□□□ -1.8
UBE2E3Q969T4 MTND2P6-201ENST00000455337 1030 ntBASIC3.81□□□□□ -1.8
UBE2E3Q969T4 RPL37P3-201ENST00000456825 293 ntBASIC3.81□□□□□ -1.8
UBE2E3Q969T4 RPS7P7-201ENST00000463499 571 ntBASIC3.81□□□□□ -1.8
UBE2E3Q969T4 CEACAMP10-202ENST00000495431 496 ntBASIC3.81□□□□□ -1.8
UBE2E3Q969T4 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.81□□□□□ -1.8
UBE2E3Q969T4 AC026726.1-201ENST00000512859 601 ntBASIC3.81□□□□□ -1.8
UBE2E3Q969T4 AC022790.1-201ENST00000522872 204 ntBASIC3.81□□□□□ -1.8
UBE2E3Q969T4 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
UBE2E3Q969T4 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.81□□□□□ -1.8
UBE2E3Q969T4 AC025260.1-201ENST00000548858 430 ntBASIC3.81□□□□□ -1.8
UBE2E3Q969T4 AC093014.1-201ENST00000548926 724 ntBASIC3.81□□□□□ -1.8
UBE2E3Q969T4 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.81□□□□□ -1.8
UBE2E3Q969T4 AC069366.1-201ENST00000583159 838 ntBASIC3.81□□□□□ -1.8
UBE2E3Q969T4 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.81□□□□□ -1.8
UBE2E3Q969T4 AC040174.2-201ENST00000602701 465 ntBASIC3.81□□□□□ -1.8
UBE2E3Q969T4 AC135178.6-201ENST00000605314 398 ntBASIC3.81□□□□□ -1.8
UBE2E3Q969T4 AL136295.6-201ENST00000610486 658 ntBASIC3.81□□□□□ -1.8
UBE2E3Q969T4 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.81□□□□□ -1.8
UBE2E3Q969T4 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.81□□□□□ -1.8
UBE2E3Q969T4 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.81□□□□□ -1.8
UBE2E3Q969T4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.81□□□□□ -1.8
UBE2E3Q969T4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.81□□□□□ -1.8
UBE2E3Q969T4 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
UBE2E3Q969T4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms