Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 MIR1251-201ENST00000408552 70 ntBASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 AC245028.1-201ENST00000423259 256 ntBASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 CHIAP3-201ENST00000423668 1133 ntBASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 AC023141.6-201ENST00000429418 337 ntBASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 BMS1P19-201ENST00000433925 393 ntBASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 UBE2V2P1-201ENST00000434717 398 ntBASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 AC096638.2-201ENST00000434965 711 ntBASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 CFTRP1-201ENST00000456646 183 ntBASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 RPL38P1-201ENST00000460914 211 ntBASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 SNRPGP3-201ENST00000469405 227 ntBASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 AC105137.1-201ENST00000484355 562 ntBASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 RPL7P47-201ENST00000497299 556 ntBASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 AC022616.2-201ENST00000523185 300 ntBASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 AC124312.6-202ENST00000623624 418 ntBASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 MIR4278-201ENST00000636094 69 ntBASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLHC1Q8NHS4 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 AC119744.1-201ENST00000454746 1715 ntBASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 RNU1-89P-201ENST00000384592 164 ntBASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 RPS27AP11-201ENST00000402798 447 ntBASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 NPM1P34-201ENST00000428821 893 ntBASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 AC073143.1-201ENST00000436316 395 ntBASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 MTCYBP12-201ENST00000440559 1134 ntBASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 HMGN2P21-201ENST00000447764 270 ntBASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 RPS11P1-201ENST00000451072 473 ntBASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 RPL7P48-201ENST00000461513 746 ntBASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 AC092691.2-201ENST00000461787 803 ntBASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 AC078785.3-201ENST00000476607 425 ntBASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 AC091167.1-201ENST00000492017 396 ntBASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 RPS27AP13-201ENST00000498403 237 ntBASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 AC109458.1-201ENST00000508858 316 ntBASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 AC106806.2-201ENST00000509365 500 ntBASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 AC009643.1-201ENST00000532030 391 ntBASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 MIR6868-201ENST00000611215 58 ntBASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 AC121761.2-201ENST00000617300 689 ntBASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 AC000367.1-201ENST00000452711 1766 ntBASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLHC1Q8NHS4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 MAPK10-373ENST00000641983 6772 ntBASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 SNORA60-201ENST00000362396 134 ntBASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 RNA5SP322-201ENST00000363617 119 ntBASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 RNU6-317P-201ENST00000384031 107 ntBASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 RPL7P4-203ENST00000430239 730 ntBASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.8□□□□□ -1.8
CLHC1Q8NHS4 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms