Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AL157827.1-201ENST00000447622 132 ntBASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 AL163973.1-201ENST00000484753 577 ntBASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 RN7SKP92-201ENST00000517266 244 ntBASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 AC060775.1-201ENST00000518241 520 ntBASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 OR4R1P-201ENST00000529879 463 ntBASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 OR8R1P-201ENST00000543943 764 ntBASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 AC123904.2-201ENST00000548059 300 ntBASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 AC024614.2-201ENST00000577584 372 ntBASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 OR10AB1P-201ENST00000609613 938 ntBASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 EIF3FP1-201ENST00000613970 806 ntBASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 MRPL57P1-201ENST00000621486 265 ntBASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 MIR4302-201ENST00000638058 60 ntBASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 MTCO1P7-201ENST00000419523 1542 ntBASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 CASC19-228ENST00000641414 1684 ntBASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 RAD17P2-201ENST00000451754 1977 ntBASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 TMSB4XP2-201ENST00000335179 210 ntBASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 Y_RNA.14-201ENST00000362415 103 ntBASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 RNU5E-1-201ENST00000362477 120 ntBASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 Y_RNA.210-201ENST00000364161 110 ntBASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 Y_RNA.414-201ENST00000384011 101 ntBASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 RNU6-886P-201ENST00000384319 105 ntBASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 MIR1-2-201ENST00000384961 85 ntBASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 AP000275.1-201ENST00000411943 390 ntBASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 AC013404.1-201ENST00000413068 249 ntBASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 EIF4EP1-201ENST00000422311 642 ntBASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 COX6CP15-201ENST00000426313 211 ntBASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 RPL21P2-201ENST00000440049 481 ntBASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 AC023512.1-201ENST00000444513 499 ntBASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 AC092647.2-201ENST00000452998 253 ntBASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 RPL7P22-201ENST00000466005 733 ntBASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 AC083906.1-201ENST00000509298 406 ntBASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 PRMT5P1-201ENST00000514351 598 ntBASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 RNU4-29P-201ENST00000515943 174 ntBASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 RNU6-1220P-201ENST00000517126 108 ntBASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 RNU6-111P-201ENST00000517179 105 ntBASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 TRAV15-201ENST00000556680 249 ntBASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 IGHV3-29-201ENST00000604817 344 ntBASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 AC129915.3-201ENST00000634128 948 ntBASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.63□□□□□ -1.35
NPAS3Q8IXF0 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
NPAS3Q8IXF0 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms