Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 RPS27AP11-201ENST00000402798 447 ntBASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 RPL7AP73-201ENST00000413490 353 ntBASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 AL136097.1-201ENST00000456945 913 ntBASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 RNU7-27P-201ENST00000459281 62 ntBASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 RPL7P48-201ENST00000461513 746 ntBASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 RPL23AP14-201ENST00000468281 468 ntBASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 AC091167.1-201ENST00000492017 396 ntBASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 AC084757.1-201ENST00000559987 490 ntBASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 AL133457.1-201ENST00000564251 987 ntBASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 OR6R2P-201ENST00000609216 300 ntBASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 AL592437.2-201ENST00000421655 2434 ntBASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC50Q8IVM0 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 HMGB3P19-201ENST00000403971 560 ntBASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 AL138785.1-201ENST00000425821 331 ntBASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 HIGD1AP4-201ENST00000430194 280 ntBASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 KCTD9P3-201ENST00000434597 1169 ntBASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 AC007537.2-201ENST00000472093 511 ntBASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 RN7SL860P-201ENST00000473738 223 ntBASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 RPS27AP13-201ENST00000498403 237 ntBASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 MTCO1P31-201ENST00000506355 492 ntBASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 IGBP1P5-201ENST00000507524 1000 ntBASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 KPNA2P3-201ENST00000584190 848 ntBASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 AC011477.5-201ENST00000586571 259 ntBASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 AC022146.1-201ENST00000595307 847 ntBASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 AC010680.3-201ENST00000604215 520 ntBASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 MIR8059-201ENST00000620427 81 ntBASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC50Q8IVM0 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC50Q8IVM0 AC009229.4-201ENST00000623854 1947 ntBASIC4.15□□□□□ -1.74
CCDC50Q8IVM0 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC50Q8IVM0 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC50Q8IVM0 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC50Q8IVM0 AL445437.1-201ENST00000623157 3087 ntBASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 RNU1-32P-201ENST00000363937 159 ntBASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 RNU6-40P-201ENST00000384254 107 ntBASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 AC009237.5-201ENST00000414271 501 ntBASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 CHIAP3-201ENST00000423668 1133 ntBASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 FTH1P6-201ENST00000430768 320 ntBASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 AC092013.1-201ENST00000438795 332 ntBASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 HMGB1P37-201ENST00000439613 609 ntBASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 AC114878.1-201ENST00000441166 358 ntBASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 EIF2S2P2-201ENST00000447161 982 ntBASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 AL500522.2-201ENST00000448562 343 ntBASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 AC006463.2-201ENST00000473326 348 ntBASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 AP000926.1-201ENST00000479573 241 ntBASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 CDH12P4-201ENST00000517835 295 ntBASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 CDH12P3-201ENST00000517935 295 ntBASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 CDH12P1-201ENST00000518435 295 ntBASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 AC023575.1-201ENST00000580510 358 ntBASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 AC110743.1-201ENST00000584870 478 ntBASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 MIR3138-201ENST00000585238 82 ntBASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 MTCO3P22-201ENST00000603219 784 ntBASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 AL049844.2-201ENST00000604280 628 ntBASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 AC090525.3-201ENST00000605601 189 ntBASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 AC055764.2-201ENST00000610089 670 ntBASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 MIR6868-201ENST00000611215 58 ntBASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 AL592295.2-201ENST00000612578 206 ntBASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms