Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC2.46□□□□□ -2.01
CSMD3Q7Z407 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
CSMD3Q7Z407 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC2.46□□□□□ -2.02
CSMD3Q7Z407 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
CSMD3Q7Z407 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CSMD3Q7Z407 RNU6-579P-201ENST00000516879 102 ntBASIC2.46□□□□□ -2.02
CSMD3Q7Z407 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC2.46□□□□□ -2.02
CSMD3Q7Z407 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC2.46□□□□□ -2.02
CSMD3Q7Z407 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CSMD3Q7Z407 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CSMD3Q7Z407 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CSMD3Q7Z407 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CSMD3Q7Z407 AL031595.2-201ENST00000624215 19071 ntBASIC2.46□□□□□ -2.02
CSMD3Q7Z407 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC2.46□□□□□ -2.02
CSMD3Q7Z407 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CSMD3Q7Z407 AC104623.2-202ENST00000623477 4002 ntBASIC2.46□□□□□ -2.02
CSMD3Q7Z407 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CSMD3Q7Z407 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CSMD3Q7Z407 RNA5SP247-201ENST00000411181 105 ntBASIC2.46□□□□□ -2.02
CSMD3Q7Z407 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC2.46□□□□□ -2.02
CSMD3Q7Z407 U3.44-201ENST00000458938 192 ntBASIC2.46□□□□□ -2.02
CSMD3Q7Z407 RNA5SP341-201ENST00000516261 117 ntBASIC2.46□□□□□ -2.02
CSMD3Q7Z407 AC087276.1-201ENST00000529659 480 ntBASIC2.46□□□□□ -2.02
CSMD3Q7Z407 AC135001.1-201ENST00000544546 283 ntBASIC2.46□□□□□ -2.02
CSMD3Q7Z407 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC2.46□□□□□ -2.02
CSMD3Q7Z407 IGKV2OR2-8-201ENST00000558710 300 ntBASIC2.46□□□□□ -2.02
CSMD3Q7Z407 AC073657.2-201ENST00000605661 303 ntBASIC2.46□□□□□ -2.02
CSMD3Q7Z407 RNVU1-4-201ENST00000612985 164 ntBASIC2.46□□□□□ -2.02
CSMD3Q7Z407 AC015871.5-202ENST00000623252 701 ntBASIC2.46□□□□□ -2.02
CSMD3Q7Z407 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC2.46□□□□□ -2.02
CSMD3Q7Z407 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CSMD3Q7Z407 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.46□□□□□ -2.02
CSMD3Q7Z407 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
CSMD3Q7Z407 DMD-211ENST00000378707 7410 ntTSL 5 BASIC2.46□□□□□ -2.02
CSMD3Q7Z407 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 RNU6-304P-201ENST00000364855 107 ntBASIC2.45□□□□□ -2.02
CSMD3Q7Z407 SETP9-201ENST00000423837 832 ntBASIC2.45□□□□□ -2.02
CSMD3Q7Z407 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 UBA52P3-201ENST00000491303 382 ntBASIC2.45□□□□□ -2.02
CSMD3Q7Z407 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 BTBD10P1-201ENST00000549824 1352 ntBASIC2.45□□□□□ -2.02
CSMD3Q7Z407 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 AC107083.1-201ENST00000439643 279 ntBASIC2.45□□□□□ -2.02
CSMD3Q7Z407 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 RNU6-513P-201ENST00000516104 104 ntBASIC2.45□□□□□ -2.02
CSMD3Q7Z407 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 AC058791.1-201ENST00000608412 3198 ntBASIC2.45□□□□□ -2.02
CSMD3Q7Z407 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
CSMD3Q7Z407 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 AC007685.1-201ENST00000329806 452 ntBASIC2.44□□□□□ -2.02
CSMD3Q7Z407 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 SAGE2P-201ENST00000420011 2126 ntBASIC2.44□□□□□ -2.02
CSMD3Q7Z407 RPS20P32-201ENST00000456044 356 ntBASIC2.44□□□□□ -2.02
CSMD3Q7Z407 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 AP002884.2-201ENST00000471647 395 ntBASIC2.44□□□□□ -2.02
CSMD3Q7Z407 AC006445.1-201ENST00000491925 405 ntBASIC2.44□□□□□ -2.02
CSMD3Q7Z407 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 AC138938.1-201ENST00000515431 782 ntBASIC2.44□□□□□ -2.02
CSMD3Q7Z407 IGLV3-26-201ENST00000520756 302 ntBASIC2.44□□□□□ -2.02
CSMD3Q7Z407 AC138832.1-201ENST00000522871 556 ntBASIC2.44□□□□□ -2.02
CSMD3Q7Z407 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 TRAV15-201ENST00000556680 249 ntBASIC2.44□□□□□ -2.02
CSMD3Q7Z407 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 AC015802.5-201ENST00000607478 399 ntBASIC2.44□□□□□ -2.02
CSMD3Q7Z407 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC2.44□□□□□ -2.02
CSMD3Q7Z407 MIR7111-201ENST00000619751 72 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms