Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.16□□□□□ -1.74
C11orf88Q6PI97 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
C11orf88Q6PI97 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
C11orf88Q6PI97 U3.3-201ENST00000362986 216 ntBASIC4.16□□□□□ -1.74
C11orf88Q6PI97 MIR649-201ENST00000384843 97 ntBASIC4.16□□□□□ -1.74
C11orf88Q6PI97 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
C11orf88Q6PI97 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.16□□□□□ -1.74
C11orf88Q6PI97 QRSL1P2-201ENST00000418582 964 ntBASIC4.16□□□□□ -1.74
C11orf88Q6PI97 OR2X1P-201ENST00000421144 687 ntBASIC4.16□□□□□ -1.74
C11orf88Q6PI97 AC009237.2-201ENST00000421358 284 ntBASIC4.16□□□□□ -1.74
C11orf88Q6PI97 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.16□□□□□ -1.74
C11orf88Q6PI97 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.16□□□□□ -1.74
C11orf88Q6PI97 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.16□□□□□ -1.74
C11orf88Q6PI97 AL137845.2-201ENST00000444292 988 ntBASIC4.16□□□□□ -1.74
C11orf88Q6PI97 AC044797.1-201ENST00000445744 679 ntBASIC4.16□□□□□ -1.74
C11orf88Q6PI97 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.16□□□□□ -1.74
C11orf88Q6PI97 NPM1P49-201ENST00000448027 714 ntBASIC4.16□□□□□ -1.74
C11orf88Q6PI97 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.16□□□□□ -1.74
C11orf88Q6PI97 FABP3P2-201ENST00000453169 399 ntBASIC4.16□□□□□ -1.74
C11orf88Q6PI97 AL691482.1-201ENST00000453255 87 ntBASIC4.16□□□□□ -1.74
C11orf88Q6PI97 AC108022.1-201ENST00000493466 478 ntBASIC4.16□□□□□ -1.74
C11orf88Q6PI97 RPS6P4-201ENST00000494693 758 ntBASIC4.16□□□□□ -1.74
C11orf88Q6PI97 AC068305.1-201ENST00000497406 726 ntBASIC4.16□□□□□ -1.74
C11orf88Q6PI97 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.16□□□□□ -1.74
C11orf88Q6PI97 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
C11orf88Q6PI97 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.16□□□□□ -1.74
C11orf88Q6PI97 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
C11orf88Q6PI97 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.16□□□□□ -1.74
C11orf88Q6PI97 AP004242.1-201ENST00000533701 349 ntBASIC4.16□□□□□ -1.74
C11orf88Q6PI97 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.16□□□□□ -1.74
C11orf88Q6PI97 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.16□□□□□ -1.74
C11orf88Q6PI97 AC087477.6-201ENST00000559595 843 ntBASIC4.16□□□□□ -1.74
C11orf88Q6PI97 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.16□□□□□ -1.74
C11orf88Q6PI97 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.16□□□□□ -1.74
C11orf88Q6PI97 AC007687.1-201ENST00000602704 304 ntBASIC4.16□□□□□ -1.74
C11orf88Q6PI97 RPAP2P1-201ENST00000603626 1168 ntBASIC4.16□□□□□ -1.74
C11orf88Q6PI97 IGHV3-29-201ENST00000604817 344 ntBASIC4.16□□□□□ -1.74
C11orf88Q6PI97 AL445222.1-201ENST00000607259 628 ntBASIC4.16□□□□□ -1.74
C11orf88Q6PI97 AL513477.2-201ENST00000607858 568 ntBASIC4.16□□□□□ -1.74
C11orf88Q6PI97 AP000238.1-201ENST00000608759 426 ntBASIC4.16□□□□□ -1.74
C11orf88Q6PI97 AC092574.1-201ENST00000609771 420 ntBASIC4.16□□□□□ -1.74
C11orf88Q6PI97 AC068722.2-201ENST00000618734 544 ntBASIC4.16□□□□□ -1.74
C11orf88Q6PI97 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.16□□□□□ -1.74
C11orf88Q6PI97 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.16□□□□□ -1.74
C11orf88Q6PI97 AC005086.4-201ENST00000623065 213 ntBASIC4.16□□□□□ -1.74
C11orf88Q6PI97 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.16□□□□□ -1.74
C11orf88Q6PI97 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.16□□□□□ -1.74
C11orf88Q6PI97 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.16□□□□□ -1.74
C11orf88Q6PI97 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
C11orf88Q6PI97 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.16□□□□□ -1.74
C11orf88Q6PI97 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
C11orf88Q6PI97 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
C11orf88Q6PI97 AC010300.1-201ENST00000600671 5134 ntBASIC4.15□□□□□ -1.74
C11orf88Q6PI97 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
C11orf88Q6PI97 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
C11orf88Q6PI97 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
C11orf88Q6PI97 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.15□□□□□ -1.74
C11orf88Q6PI97 AL355852.1-201ENST00000454081 1771 ntBASIC4.15□□□□□ -1.74
C11orf88Q6PI97 AC009643.2-201ENST00000603543 1448 ntBASIC4.15□□□□□ -1.74
C11orf88Q6PI97 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
C11orf88Q6PI97 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
C11orf88Q6PI97 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
C11orf88Q6PI97 RN7SKP103-201ENST00000363848 320 ntBASIC4.15□□□□□ -1.75
C11orf88Q6PI97 RNU4-4P-201ENST00000364588 130 ntBASIC4.15□□□□□ -1.75
C11orf88Q6PI97 AC234772.1-201ENST00000377927 937 ntBASIC4.15□□□□□ -1.75
C11orf88Q6PI97 RNU6-921P-201ENST00000384361 107 ntBASIC4.15□□□□□ -1.75
C11orf88Q6PI97 RNU1-106P-201ENST00000384382 164 ntBASIC4.15□□□□□ -1.75
C11orf88Q6PI97 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
C11orf88Q6PI97 AL121972.1-201ENST00000402023 252 ntBASIC4.15□□□□□ -1.75
C11orf88Q6PI97 MIR1182-201ENST00000408363 97 ntBASIC4.15□□□□□ -1.75
C11orf88Q6PI97 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.15□□□□□ -1.75
C11orf88Q6PI97 RBMY2KP-201ENST00000418221 992 ntBASIC4.15□□□□□ -1.75
C11orf88Q6PI97 RGS17P1-201ENST00000423358 553 ntBASIC4.15□□□□□ -1.75
C11orf88Q6PI97 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.15□□□□□ -1.75
C11orf88Q6PI97 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.15□□□□□ -1.75
C11orf88Q6PI97 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.15□□□□□ -1.75
C11orf88Q6PI97 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
C11orf88Q6PI97 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.15□□□□□ -1.75
C11orf88Q6PI97 KNOP1P3-201ENST00000446933 426 ntBASIC4.15□□□□□ -1.75
C11orf88Q6PI97 AC009127.1-201ENST00000467090 155 ntBASIC4.15□□□□□ -1.75
C11orf88Q6PI97 AP001086.1-201ENST00000494882 321 ntBASIC4.15□□□□□ -1.75
C11orf88Q6PI97 AC104164.2-201ENST00000496953 495 ntBASIC4.15□□□□□ -1.75
C11orf88Q6PI97 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.15□□□□□ -1.75
C11orf88Q6PI97 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.15□□□□□ -1.75
C11orf88Q6PI97 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.15□□□□□ -1.75
C11orf88Q6PI97 SNORA70.14-201ENST00000516205 110 ntBASIC4.15□□□□□ -1.75
C11orf88Q6PI97 RN7SKP116-201ENST00000516902 319 ntBASIC4.15□□□□□ -1.75
C11orf88Q6PI97 RN7SKP147-201ENST00000517154 244 ntBASIC4.15□□□□□ -1.75
C11orf88Q6PI97 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.15□□□□□ -1.75
C11orf88Q6PI97 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.15□□□□□ -1.75
C11orf88Q6PI97 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.15□□□□□ -1.75
C11orf88Q6PI97 AC068339.2-201ENST00000534395 618 ntBASIC4.15□□□□□ -1.75
C11orf88Q6PI97 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.15□□□□□ -1.75
C11orf88Q6PI97 LSM6P2-201ENST00000552208 177 ntBASIC4.15□□□□□ -1.75
C11orf88Q6PI97 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
C11orf88Q6PI97 AGGF1P6-201ENST00000569213 976 ntBASIC4.15□□□□□ -1.75
C11orf88Q6PI97 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.15□□□□□ -1.75
C11orf88Q6PI97 SNORD39.3-201ENST00000584451 71 ntBASIC4.15□□□□□ -1.75
C11orf88Q6PI97 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.15□□□□□ -1.75
C11orf88Q6PI97 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms