Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.17□□□□□ -1.9
LRRK2Q5S007 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC3.17□□□□□ -1.9
LRRK2Q5S007 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.17□□□□□ -1.9
LRRK2Q5S007 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
LRRK2Q5S007 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LRRK2Q5S007 YES1-203ENST00000577961 4554 ntTSL 5 BASIC3.16□□□□□ -1.9
LRRK2Q5S007 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
LRRK2Q5S007 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LRRK2Q5S007 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.16□□□□□ -1.9
LRRK2Q5S007 SAMMSON-213ENST00000641336 1521 ntBASIC3.16□□□□□ -1.9
LRRK2Q5S007 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
LRRK2Q5S007 AC234772.1-201ENST00000377927 937 ntBASIC3.16□□□□□ -1.9
LRRK2Q5S007 BTF3P9-201ENST00000418784 283 ntBASIC3.16□□□□□ -1.9
LRRK2Q5S007 AL139413.1-201ENST00000421309 217 ntBASIC3.16□□□□□ -1.9
LRRK2Q5S007 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.16□□□□□ -1.9
LRRK2Q5S007 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.16□□□□□ -1.9
LRRK2Q5S007 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.16□□□□□ -1.9
LRRK2Q5S007 FTH1P1-201ENST00000437933 532 ntBASIC3.16□□□□□ -1.9
LRRK2Q5S007 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.16□□□□□ -1.9
LRRK2Q5S007 AC097262.1-201ENST00000452559 548 ntBASIC3.16□□□□□ -1.9
LRRK2Q5S007 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.16□□□□□ -1.9
LRRK2Q5S007 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.16□□□□□ -1.9
LRRK2Q5S007 AC016839.1-201ENST00000578162 867 ntBASIC3.16□□□□□ -1.9
LRRK2Q5S007 VN1R78P-201ENST00000597393 564 ntBASIC3.16□□□□□ -1.9
LRRK2Q5S007 U4.6-201ENST00000621618 127 ntBASIC3.16□□□□□ -1.9
LRRK2Q5S007 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LRRK2Q5S007 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LRRK2Q5S007 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.16□□□□□ -1.9
LRRK2Q5S007 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.16□□□□□ -1.9
LRRK2Q5S007 ASNSP3-201ENST00000451989 1306 ntBASIC3.16□□□□□ -1.9
LRRK2Q5S007 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.16□□□□□ -1.9
LRRK2Q5S007 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
LRRK2Q5S007 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
LRRK2Q5S007 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LRRK2Q5S007 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
LRRK2Q5S007 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.16□□□□□ -1.9
LRRK2Q5S007 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.16□□□□□ -1.9
LRRK2Q5S007 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.16□□□□□ -1.9
LRRK2Q5S007 AL034403.1-201ENST00000399414 885 ntBASIC3.16□□□□□ -1.9
LRRK2Q5S007 AC239809.1-201ENST00000450470 217 ntBASIC3.16□□□□□ -1.9
LRRK2Q5S007 AC108751.2-201ENST00000469993 231 ntBASIC3.16□□□□□ -1.9
LRRK2Q5S007 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.16□□□□□ -1.9
LRRK2Q5S007 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.16□□□□□ -1.9
LRRK2Q5S007 snoU109.6-201ENST00000516831 118 ntBASIC3.16□□□□□ -1.9
LRRK2Q5S007 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.16□□□□□ -1.9
LRRK2Q5S007 RPL23AP92-201ENST00000603609 255 ntBASIC3.16□□□□□ -1.9
LRRK2Q5S007 MIR7702-201ENST00000621931 59 ntBASIC3.16□□□□□ -1.9
LRRK2Q5S007 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
LRRK2Q5S007 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
LRRK2Q5S007 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LRRK2Q5S007 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
LRRK2Q5S007 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
LRRK2Q5S007 OR5H2-201ENST00000355273 945 ntBASIC3.15□□□□□ -1.91
LRRK2Q5S007 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LRRK2Q5S007 REREP1Y-201ENST00000422655 198 ntBASIC3.15□□□□□ -1.91
LRRK2Q5S007 AC093698.1-201ENST00000423843 571 ntBASIC3.15□□□□□ -1.91
LRRK2Q5S007 REREP2Y-201ENST00000439103 200 ntBASIC3.15□□□□□ -1.91
LRRK2Q5S007 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.15□□□□□ -1.91
LRRK2Q5S007 RPS20P32-201ENST00000456044 356 ntBASIC3.15□□□□□ -1.91
LRRK2Q5S007 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.15□□□□□ -1.91
LRRK2Q5S007 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.15□□□□□ -1.91
LRRK2Q5S007 PTGES3P3-201ENST00000511479 482 ntBASIC3.15□□□□□ -1.91
LRRK2Q5S007 RNA5SP208-201ENST00000516156 78 ntBASIC3.15□□□□□ -1.91
LRRK2Q5S007 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.15□□□□□ -1.91
LRRK2Q5S007 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.15□□□□□ -1.91
LRRK2Q5S007 MIR4435-1-201ENST00000582552 80 ntBASIC3.15□□□□□ -1.91
LRRK2Q5S007 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.15□□□□□ -1.91
LRRK2Q5S007 IGHV3-29-201ENST00000604817 344 ntBASIC3.15□□□□□ -1.91
LRRK2Q5S007 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LRRK2Q5S007 AL049781.1-201ENST00000623195 3585 ntBASIC3.15□□□□□ -1.91
LRRK2Q5S007 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.15□□□□□ -1.91
LRRK2Q5S007 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
LRRK2Q5S007 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LRRK2Q5S007 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
LRRK2Q5S007 RPS26P2-201ENST00000440331 348 ntBASIC3.15□□□□□ -1.91
LRRK2Q5S007 VN1R25P-201ENST00000443385 738 ntBASIC3.15□□□□□ -1.91
LRRK2Q5S007 AL157385.1-201ENST00000446973 268 ntBASIC3.15□□□□□ -1.91
LRRK2Q5S007 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.15□□□□□ -1.91
LRRK2Q5S007 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.15□□□□□ -1.91
LRRK2Q5S007 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC3.15□□□□□ -1.91
LRRK2Q5S007 SNORA62.6-201ENST00000606322 83 ntBASIC3.15□□□□□ -1.91
LRRK2Q5S007 AC015802.5-201ENST00000607478 399 ntBASIC3.15□□□□□ -1.91
LRRK2Q5S007 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.15□□□□□ -1.91
LRRK2Q5S007 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.14□□□□□ -1.91
LRRK2Q5S007 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC3.14□□□□□ -1.91
LRRK2Q5S007 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.14□□□□□ -1.91
LRRK2Q5S007 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.14□□□□□ -1.91
LRRK2Q5S007 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.14□□□□□ -1.91
LRRK2Q5S007 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.14□□□□□ -1.91
LRRK2Q5S007 RPL23AP25-201ENST00000430973 463 ntBASIC3.14□□□□□ -1.91
LRRK2Q5S007 SNORA71B-202ENST00000439232 272 ntBASIC3.14□□□□□ -1.91
LRRK2Q5S007 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.14□□□□□ -1.91
LRRK2Q5S007 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.14□□□□□ -1.91
LRRK2Q5S007 RNA5SP341-201ENST00000516261 117 ntBASIC3.14□□□□□ -1.91
LRRK2Q5S007 AC008694.2-201ENST00000517591 306 ntBASIC3.14□□□□□ -1.91
LRRK2Q5S007 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.14□□□□□ -1.91
LRRK2Q5S007 GTF3AP2-201ENST00000557014 266 ntBASIC3.14□□□□□ -1.91
LRRK2Q5S007 MRPS21P9-201ENST00000571150 257 ntBASIC3.14□□□□□ -1.91
LRRK2Q5S007 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.14□□□□□ -1.91
LRRK2Q5S007 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms