Protein–RNA interactions for Protein: Q00341

HDLBP, Vigilin, humanhuman

Known RBP Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBPQ00341 RNU6-441P-201ENST00000384545 106 ntBASIC6.37□□□□□ -1.39
HDLBPQ00341 MIR649-201ENST00000384843 97 ntBASIC6.37□□□□□ -1.39
HDLBPQ00341 MIR105-1-201ENST00000385222 81 ntBASIC6.37□□□□□ -1.39
HDLBPQ00341 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HDLBPQ00341 AC007066.1-201ENST00000392902 381 ntBASIC6.37□□□□□ -1.39
HDLBPQ00341 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC6.37□□□□□ -1.39
HDLBPQ00341 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC6.37□□□□□ -1.39
HDLBPQ00341 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.37□□□□□ -1.39
HDLBPQ00341 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.37□□□□□ -1.39
HDLBPQ00341 AL592447.1-201ENST00000447592 540 ntBASIC6.37□□□□□ -1.39
HDLBPQ00341 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC6.37□□□□□ -1.39
HDLBPQ00341 ST13P12-201ENST00000508958 1094 ntBASIC6.37□□□□□ -1.39
HDLBPQ00341 AC091912.1-201ENST00000511351 248 ntBASIC6.37□□□□□ -1.39
HDLBPQ00341 AC004980.4-201ENST00000513375 203 ntBASIC6.37□□□□□ -1.39
HDLBPQ00341 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.37□□□□□ -1.39
HDLBPQ00341 AC006499.2-201ENST00000513470 337 ntBASIC6.37□□□□□ -1.39
HDLBPQ00341 AL117351.2-201ENST00000513571 157 ntBASIC6.37□□□□□ -1.39
HDLBPQ00341 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.37□□□□□ -1.39
HDLBPQ00341 NPM1P6-201ENST00000521088 871 ntBASIC6.37□□□□□ -1.39
HDLBPQ00341 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC6.37□□□□□ -1.39
HDLBPQ00341 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HDLBPQ00341 ZNF705CP-201ENST00000530515 889 ntBASIC6.37□□□□□ -1.39
HDLBPQ00341 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.37□□□□□ -1.39
HDLBPQ00341 MIR4637-201ENST00000582405 84 ntBASIC6.37□□□□□ -1.39
HDLBPQ00341 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.37□□□□□ -1.39
HDLBPQ00341 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HDLBPQ00341 AC112187.2-201ENST00000604345 283 ntBASIC6.37□□□□□ -1.39
HDLBPQ00341 AC005084.1-201ENST00000605160 304 ntBASIC6.37□□□□□ -1.39
HDLBPQ00341 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC6.37□□□□□ -1.39
HDLBPQ00341 AC107214.2-201ENST00000608204 634 ntBASIC6.37□□□□□ -1.39
HDLBPQ00341 AC078899.5-201ENST00000612475 178 ntBASIC6.37□□□□□ -1.39
HDLBPQ00341 MIR6798-201ENST00000612887 67 ntBASIC6.37□□□□□ -1.39
HDLBPQ00341 AC068722.2-201ENST00000618734 544 ntBASIC6.37□□□□□ -1.39
HDLBPQ00341 AC009509.4-201ENST00000619202 509 ntBASIC6.37□□□□□ -1.39
HDLBPQ00341 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.37□□□□□ -1.39
HDLBPQ00341 uc_338.7-201ENST00000621834 124 ntBASIC6.37□□□□□ -1.39
HDLBPQ00341 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
HDLBPQ00341 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HDLBPQ00341 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HDLBPQ00341 AC093671.1-201ENST00000624981 2929 ntBASIC6.37□□□□□ -1.39
HDLBPQ00341 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC6.37□□□□□ -1.39
HDLBPQ00341 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HDLBPQ00341 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
HDLBPQ00341 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.36□□□□□ -1.39
HDLBPQ00341 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.36□□□□□ -1.39
HDLBPQ00341 AC114774.1-201ENST00000507410 1770 ntBASIC6.36□□□□□ -1.39
HDLBPQ00341 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
HDLBPQ00341 PABPC1P9-201ENST00000426076 1612 ntBASIC6.36□□□□□ -1.39
HDLBPQ00341 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.36□□□□□ -1.39
HDLBPQ00341 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HDLBPQ00341 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
HDLBPQ00341 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
HDLBPQ00341 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
HDLBPQ00341 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HDLBPQ00341 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HDLBPQ00341 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HDLBPQ00341 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
HDLBPQ00341 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HDLBPQ00341 RN7SKP104-201ENST00000362605 328 ntBASIC6.36□□□□□ -1.39
HDLBPQ00341 RNU6-1119P-201ENST00000384349 108 ntBASIC6.36□□□□□ -1.39
HDLBPQ00341 AL023807.1-201ENST00000407932 359 ntBASIC6.36□□□□□ -1.39
HDLBPQ00341 MIR1182-201ENST00000408363 97 ntBASIC6.36□□□□□ -1.39
HDLBPQ00341 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC6.36□□□□□ -1.39
HDLBPQ00341 AL158073.1-201ENST00000426848 1104 ntBASIC6.36□□□□□ -1.39
HDLBPQ00341 PRELID3BP10-201ENST00000431957 584 ntBASIC6.36□□□□□ -1.39
HDLBPQ00341 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC6.36□□□□□ -1.39
HDLBPQ00341 YWHAZP8-201ENST00000436935 731 ntBASIC6.36□□□□□ -1.39
HDLBPQ00341 RPS24P1-201ENST00000438550 371 ntBASIC6.36□□□□□ -1.39
HDLBPQ00341 AC006466.1-201ENST00000438721 289 ntBASIC6.36□□□□□ -1.39
HDLBPQ00341 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC6.36□□□□□ -1.39
HDLBPQ00341 H2AFZP6-201ENST00000444403 394 ntBASIC6.36□□□□□ -1.39
HDLBPQ00341 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC6.36□□□□□ -1.39
HDLBPQ00341 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.36□□□□□ -1.39
HDLBPQ00341 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.36□□□□□ -1.39
HDLBPQ00341 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.36□□□□□ -1.39
HDLBPQ00341 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC6.36□□□□□ -1.39
HDLBPQ00341 AC010625.1-201ENST00000511296 403 ntBASIC6.36□□□□□ -1.39
HDLBPQ00341 RNU6-720P-201ENST00000516363 108 ntBASIC6.36□□□□□ -1.39
HDLBPQ00341 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC6.36□□□□□ -1.39
HDLBPQ00341 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.36□□□□□ -1.39
HDLBPQ00341 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.36□□□□□ -1.39
HDLBPQ00341 AC008127.2-201ENST00000549925 1075 ntBASIC6.36□□□□□ -1.39
HDLBPQ00341 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HDLBPQ00341 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC6.36□□□□□ -1.39
HDLBPQ00341 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.36□□□□□ -1.39
HDLBPQ00341 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.36□□□□□ -1.39
HDLBPQ00341 AC115286.1-201ENST00000604298 434 ntBASIC6.36□□□□□ -1.39
HDLBPQ00341 AC092354.2-201ENST00000607786 514 ntBASIC6.36□□□□□ -1.39
HDLBPQ00341 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.36□□□□□ -1.39
HDLBPQ00341 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HDLBPQ00341 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
HDLBPQ00341 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
HDLBPQ00341 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HDLBPQ00341 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
HDLBPQ00341 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
HDLBPQ00341 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.35□□□□□ -1.39
HDLBPQ00341 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.35□□□□□ -1.39
HDLBPQ00341 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.35□□□□□ -1.39
HDLBPQ00341 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HDLBPQ00341 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms