Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 MIR432-201ENST00000606207 94 ntBASIC4.57□□□□□ -1.68
CCNA1P78396 AC012314.7-201ENST00000619693 93 ntBASIC4.57□□□□□ -1.68
CCNA1P78396 AL034408.1-202ENST00000636088 415 ntBASIC4.57□□□□□ -1.68
CCNA1P78396 AC009093.8-201ENST00000641769 292 ntBASIC4.57□□□□□ -1.68
CCNA1P78396 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCNA1P78396 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CCNA1P78396 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.57□□□□□ -1.68
CCNA1P78396 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCNA1P78396 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCNA1P78396 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.56□□□□□ -1.68
CCNA1P78396 DDX18P4-201ENST00000511690 1966 ntBASIC4.56□□□□□ -1.68
CCNA1P78396 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.56□□□□□ -1.68
CCNA1P78396 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCNA1P78396 AL359715.4-201ENST00000606629 1436 ntBASIC4.56□□□□□ -1.68
CCNA1P78396 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.56□□□□□ -1.68
CCNA1P78396 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.56□□□□□ -1.68
CCNA1P78396 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.56□□□□□ -1.68
CCNA1P78396 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCNA1P78396 RPL17P50-201ENST00000396131 546 ntBASIC4.56□□□□□ -1.68
CCNA1P78396 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CCNA1P78396 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.56□□□□□ -1.68
CCNA1P78396 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.56□□□□□ -1.68
CCNA1P78396 HIGD1AP4-201ENST00000430194 280 ntBASIC4.56□□□□□ -1.68
CCNA1P78396 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.56□□□□□ -1.68
CCNA1P78396 AL157827.1-201ENST00000447622 132 ntBASIC4.56□□□□□ -1.68
CCNA1P78396 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.56□□□□□ -1.68
CCNA1P78396 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.56□□□□□ -1.68
CCNA1P78396 FABP3P2-201ENST00000453169 399 ntBASIC4.56□□□□□ -1.68
CCNA1P78396 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.56□□□□□ -1.68
CCNA1P78396 AC021146.7-201ENST00000509604 775 ntBASIC4.56□□□□□ -1.68
CCNA1P78396 TCP11X3P-202ENST00000514289 1254 ntBASIC4.56□□□□□ -1.68
CCNA1P78396 NDUFA5P2-201ENST00000519723 344 ntBASIC4.56□□□□□ -1.68
CCNA1P78396 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.56□□□□□ -1.68
CCNA1P78396 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.56□□□□□ -1.68
CCNA1P78396 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.56□□□□□ -1.68
CCNA1P78396 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.56□□□□□ -1.68
CCNA1P78396 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.56□□□□□ -1.68
CCNA1P78396 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.56□□□□□ -1.68
CCNA1P78396 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.56□□□□□ -1.68
CCNA1P78396 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.56□□□□□ -1.68
CCNA1P78396 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.56□□□□□ -1.68
CCNA1P78396 SLC25A36P1-201ENST00000590111 465 ntBASIC4.56□□□□□ -1.68
CCNA1P78396 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.56□□□□□ -1.68
CCNA1P78396 AC115621.1-201ENST00000604653 858 ntBASIC4.56□□□□□ -1.68
CCNA1P78396 AC026979.4-201ENST00000606555 645 ntBASIC4.56□□□□□ -1.68
CCNA1P78396 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.56□□□□□ -1.68
CCNA1P78396 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCNA1P78396 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCNA1P78396 SAGE2P-201ENST00000420011 2126 ntBASIC4.55□□□□□ -1.68
CCNA1P78396 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CCNA1P78396 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCNA1P78396 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCNA1P78396 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.55□□□□□ -1.68
CCNA1P78396 OR11H5P-202ENST00000641612 1325 ntBASIC4.55□□□□□ -1.68
CCNA1P78396 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.55□□□□□ -1.68
CCNA1P78396 SNORA5A-201ENST00000384111 134 ntBASIC4.55□□□□□ -1.68
CCNA1P78396 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CCNA1P78396 RPS3AP25-201ENST00000411660 793 ntBASIC4.55□□□□□ -1.68
CCNA1P78396 PGBD4P8-201ENST00000412993 562 ntBASIC4.55□□□□□ -1.68
CCNA1P78396 AC093578.1-201ENST00000415219 368 ntBASIC4.55□□□□□ -1.68
CCNA1P78396 CYCSP10-201ENST00000417973 294 ntBASIC4.55□□□□□ -1.68
CCNA1P78396 MTND2P15-201ENST00000418575 892 ntBASIC4.55□□□□□ -1.68
CCNA1P78396 PRELID3BP10-201ENST00000431957 584 ntBASIC4.55□□□□□ -1.68
CCNA1P78396 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.55□□□□□ -1.68
CCNA1P78396 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.55□□□□□ -1.68
CCNA1P78396 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.55□□□□□ -1.68
CCNA1P78396 AC006511.1-201ENST00000470614 315 ntBASIC4.55□□□□□ -1.68
CCNA1P78396 AC011037.1-201ENST00000483964 558 ntBASIC4.55□□□□□ -1.68
CCNA1P78396 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.55□□□□□ -1.68
CCNA1P78396 CDH12P2-201ENST00000504393 298 ntBASIC4.55□□□□□ -1.68
CCNA1P78396 HMGN1P11-201ENST00000508668 303 ntBASIC4.55□□□□□ -1.68
CCNA1P78396 AC108120.2-201ENST00000512973 294 ntBASIC4.55□□□□□ -1.68
CCNA1P78396 IGKV2-23-201ENST00000518729 323 ntBASIC4.55□□□□□ -1.68
CCNA1P78396 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.55□□□□□ -1.68
CCNA1P78396 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.55□□□□□ -1.68
CCNA1P78396 YPEL5P3-201ENST00000547227 352 ntBASIC4.55□□□□□ -1.68
CCNA1P78396 AP004372.1-201ENST00000604842 844 ntBASIC4.55□□□□□ -1.68
CCNA1P78396 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.55□□□□□ -1.68
CCNA1P78396 AC243654.2-201ENST00000612843 443 ntBASIC4.55□□□□□ -1.68
CCNA1P78396 AL158196.1-201ENST00000616786 434 ntBASIC4.55□□□□□ -1.68
CCNA1P78396 AF001550.2-201ENST00000636643 217 ntBASIC4.55□□□□□ -1.68
CCNA1P78396 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CCNA1P78396 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCNA1P78396 AC024560.2-201ENST00000507981 1497 ntBASIC4.55□□□□□ -1.68
CCNA1P78396 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CCNA1P78396 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCNA1P78396 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.55□□□□□ -1.68
CCNA1P78396 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCNA1P78396 AC134882.1-201ENST00000603738 1676 ntBASIC4.54□□□□□ -1.68
CCNA1P78396 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCNA1P78396 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCNA1P78396 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CCNA1P78396 RN7SKP44-201ENST00000363602 316 ntBASIC4.54□□□□□ -1.68
CCNA1P78396 U8.11-201ENST00000384699 133 ntBASIC4.54□□□□□ -1.68
CCNA1P78396 U8.12-201ENST00000384701 133 ntBASIC4.54□□□□□ -1.68
CCNA1P78396 RPL21P17-201ENST00000397467 475 ntBASIC4.54□□□□□ -1.68
CCNA1P78396 MIR1251-201ENST00000408552 70 ntBASIC4.54□□□□□ -1.68
CCNA1P78396 AC004448.2-201ENST00000422360 586 ntBASIC4.54□□□□□ -1.68
CCNA1P78396 AL139247.1-201ENST00000422768 325 ntBASIC4.54□□□□□ -1.68
CCNA1P78396 RPL30P3-201ENST00000424262 333 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms