Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.36□□□□□ -1.87
UBA52P62987 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBA52P62987 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBA52P62987 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBA52P62987 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
UBA52P62987 PWAR6-201ENST00000552334 4618 ntBASIC3.35□□□□□ -1.87
UBA52P62987 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
UBA52P62987 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
UBA52P62987 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.35□□□□□ -1.87
UBA52P62987 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
UBA52P62987 EXOC5P1-201ENST00000510543 1969 ntBASIC3.35□□□□□ -1.87
UBA52P62987 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
UBA52P62987 CASC19-261ENST00000641853 1638 ntBASIC3.35□□□□□ -1.87
UBA52P62987 XIAPP3-201ENST00000312918 795 ntBASIC3.35□□□□□ -1.87
UBA52P62987 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
UBA52P62987 SNORA62.2-201ENST00000364672 152 ntBASIC3.35□□□□□ -1.87
UBA52P62987 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
UBA52P62987 AL590704.1-201ENST00000402856 794 ntBASIC3.35□□□□□ -1.87
UBA52P62987 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.35□□□□□ -1.87
UBA52P62987 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.35□□□□□ -1.87
UBA52P62987 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.35□□□□□ -1.87
UBA52P62987 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.35□□□□□ -1.87
UBA52P62987 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
UBA52P62987 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.35□□□□□ -1.87
UBA52P62987 AL445584.1-201ENST00000431451 330 ntBASIC3.35□□□□□ -1.87
UBA52P62987 AL035246.1-201ENST00000433554 1255 ntBASIC3.35□□□□□ -1.87
UBA52P62987 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.35□□□□□ -1.87
UBA52P62987 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.35□□□□□ -1.87
UBA52P62987 AC245517.2-201ENST00000442890 346 ntBASIC3.35□□□□□ -1.87
UBA52P62987 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.35□□□□□ -1.87
UBA52P62987 RPS29P31-201ENST00000446147 164 ntBASIC3.35□□□□□ -1.87
UBA52P62987 AL133547.1-201ENST00000448546 220 ntBASIC3.35□□□□□ -1.87
UBA52P62987 EIF4A1P11-201ENST00000451239 222 ntBASIC3.35□□□□□ -1.87
UBA52P62987 IFNWP4-201ENST00000453148 294 ntBASIC3.35□□□□□ -1.87
UBA52P62987 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.35□□□□□ -1.87
UBA52P62987 AC110792.1-201ENST00000491826 472 ntBASIC3.35□□□□□ -1.87
UBA52P62987 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.35□□□□□ -1.87
UBA52P62987 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.35□□□□□ -1.87
UBA52P62987 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.35□□□□□ -1.87
UBA52P62987 PDCL2P2-201ENST00000533651 189 ntBASIC3.35□□□□□ -1.87
UBA52P62987 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.35□□□□□ -1.87
UBA52P62987 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.35□□□□□ -1.87
UBA52P62987 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.35□□□□□ -1.87
UBA52P62987 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.35□□□□□ -1.87
UBA52P62987 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.35□□□□□ -1.87
UBA52P62987 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.35□□□□□ -1.87
UBA52P62987 AC039056.2-201ENST00000622261 511 ntBASIC3.35□□□□□ -1.87
UBA52P62987 MIR6500-201ENST00000622700 86 ntBASIC3.35□□□□□ -1.87
UBA52P62987 AC004777.1-201ENST00000624317 287 ntBASIC3.35□□□□□ -1.87
UBA52P62987 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.35□□□□□ -1.87
UBA52P62987 MIR7153-201ENST00000637758 57 ntBASIC3.35□□□□□ -1.87
UBA52P62987 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
UBA52P62987 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
UBA52P62987 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
UBA52P62987 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
UBA52P62987 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
UBA52P62987 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
UBA52P62987 AL451142.2-201ENST00000429076 2090 ntBASIC3.34□□□□□ -1.87
UBA52P62987 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
UBA52P62987 AL161912.2-201ENST00000565707 3007 ntBASIC3.34□□□□□ -1.87
UBA52P62987 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.34□□□□□ -1.87
UBA52P62987 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
UBA52P62987 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
UBA52P62987 SNORA71.3-201ENST00000362582 128 ntBASIC3.34□□□□□ -1.87
UBA52P62987 SNORD46.1-201ENST00000364139 104 ntBASIC3.34□□□□□ -1.87
UBA52P62987 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.34□□□□□ -1.87
UBA52P62987 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.34□□□□□ -1.87
UBA52P62987 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.34□□□□□ -1.87
UBA52P62987 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.34□□□□□ -1.87
UBA52P62987 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
UBA52P62987 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
UBA52P62987 TPT1P2-201ENST00000413105 503 ntBASIC3.34□□□□□ -1.87
UBA52P62987 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.34□□□□□ -1.87
UBA52P62987 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.34□□□□□ -1.87
UBA52P62987 RPL6P21-201ENST00000418672 846 ntBASIC3.34□□□□□ -1.87
UBA52P62987 RPS26P47-201ENST00000427219 348 ntBASIC3.34□□□□□ -1.87
UBA52P62987 AL050321.1-201ENST00000432363 400 ntBASIC3.34□□□□□ -1.87
UBA52P62987 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.34□□□□□ -1.87
UBA52P62987 TXNP1-201ENST00000441872 371 ntBASIC3.34□□□□□ -1.87
UBA52P62987 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.34□□□□□ -1.87
UBA52P62987 AC099063.2-201ENST00000446360 662 ntBASIC3.34□□□□□ -1.87
UBA52P62987 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.34□□□□□ -1.87
UBA52P62987 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.34□□□□□ -1.87
UBA52P62987 AC007688.1-201ENST00000475592 759 ntBASIC3.34□□□□□ -1.87
UBA52P62987 RPS29P19-201ENST00000479709 171 ntBASIC3.34□□□□□ -1.87
UBA52P62987 GAPDHP36-201ENST00000480688 918 ntBASIC3.34□□□□□ -1.87
UBA52P62987 AC026784.1-201ENST00000507986 352 ntBASIC3.34□□□□□ -1.87
UBA52P62987 RN7SKP60-201ENST00000516985 239 ntBASIC3.34□□□□□ -1.87
UBA52P62987 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
UBA52P62987 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.34□□□□□ -1.87
UBA52P62987 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.34□□□□□ -1.87
UBA52P62987 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.34□□□□□ -1.87
UBA52P62987 AC120057.2-201ENST00000571520 271 ntBASIC3.34□□□□□ -1.87
UBA52P62987 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.34□□□□□ -1.87
UBA52P62987 AC022655.2-201ENST00000577280 318 ntBASIC3.34□□□□□ -1.87
UBA52P62987 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.34□□□□□ -1.87
UBA52P62987 MIR4425-201ENST00000580572 84 ntBASIC3.34□□□□□ -1.87
UBA52P62987 AC107982.3-201ENST00000584957 985 ntBASIC3.34□□□□□ -1.87
UBA52P62987 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
UBA52P62987 AC112230.1-201ENST00000604342 547 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms