Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
LSM3P62310 SPTLC1P2-201ENST00000407089 121 ntBASIC3.14□□□□□ -1.91
LSM3P62310 SDCBPP2-201ENST00000424643 885 ntBASIC3.14□□□□□ -1.91
LSM3P62310 AL138785.1-201ENST00000425821 331 ntBASIC3.14□□□□□ -1.91
LSM3P62310 DNAJC19P7-201ENST00000428811 344 ntBASIC3.14□□□□□ -1.91
LSM3P62310 USP9YP9-201ENST00000429406 715 ntBASIC3.14□□□□□ -1.91
LSM3P62310 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.14□□□□□ -1.91
LSM3P62310 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.14□□□□□ -1.91
LSM3P62310 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.14□□□□□ -1.91
LSM3P62310 snoU13.1-201ENST00000459157 104 ntBASIC3.14□□□□□ -1.91
LSM3P62310 UQCRHP4-201ENST00000471686 272 ntBASIC3.14□□□□□ -1.91
LSM3P62310 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LSM3P62310 AC021205.2-201ENST00000480069 347 ntBASIC3.14□□□□□ -1.91
LSM3P62310 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.14□□□□□ -1.91
LSM3P62310 KCTD9P5-201ENST00000504141 1170 ntBASIC3.14□□□□□ -1.91
LSM3P62310 AC107934.2-201ENST00000518653 310 ntBASIC3.14□□□□□ -1.91
LSM3P62310 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.14□□□□□ -1.91
LSM3P62310 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.14□□□□□ -1.91
LSM3P62310 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LSM3P62310 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
LSM3P62310 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LSM3P62310 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LSM3P62310 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.14□□□□□ -1.91
LSM3P62310 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.14□□□□□ -1.91
LSM3P62310 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.14□□□□□ -1.91
LSM3P62310 AC011816.2-201ENST00000607089 556 ntBASIC3.14□□□□□ -1.91
LSM3P62310 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC3.14□□□□□ -1.91
LSM3P62310 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LSM3P62310 AC007529.1-201ENST00000418574 2178 ntBASIC3.14□□□□□ -1.91
LSM3P62310 AC093908.1-201ENST00000623125 8092 ntBASIC3.14□□□□□ -1.91
LSM3P62310 ELL2P4-201ENST00000446870 1376 ntBASIC3.13□□□□□ -1.91
LSM3P62310 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LSM3P62310 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LSM3P62310 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
LSM3P62310 XIAPP3-201ENST00000312918 795 ntBASIC3.13□□□□□ -1.91
LSM3P62310 OR4K17-201ENST00000315543 1032 ntBASIC3.13□□□□□ -1.91
LSM3P62310 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LSM3P62310 RNA5SP505-201ENST00000364748 108 ntBASIC3.13□□□□□ -1.91
LSM3P62310 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LSM3P62310 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
LSM3P62310 RNU6-328P-201ENST00000390887 106 ntBASIC3.13□□□□□ -1.91
LSM3P62310 AC016397.1-201ENST00000412463 242 ntBASIC3.13□□□□□ -1.91
LSM3P62310 HMGB3P23-201ENST00000414981 585 ntBASIC3.13□□□□□ -1.91
LSM3P62310 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LSM3P62310 AL356968.1-201ENST00000416622 474 ntBASIC3.13□□□□□ -1.91
LSM3P62310 COX6CP15-201ENST00000426313 211 ntBASIC3.13□□□□□ -1.91
LSM3P62310 ISCA1P2-201ENST00000438679 421 ntBASIC3.13□□□□□ -1.91
LSM3P62310 SETD6P1-201ENST00000444575 317 ntBASIC3.13□□□□□ -1.91
LSM3P62310 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.13□□□□□ -1.91
LSM3P62310 AL513533.1-201ENST00000453728 415 ntBASIC3.13□□□□□ -1.91
LSM3P62310 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LSM3P62310 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC3.13□□□□□ -1.91
LSM3P62310 AC025674.1-201ENST00000507074 324 ntBASIC3.13□□□□□ -1.91
LSM3P62310 ATG10-208ENST00000513634 618 ntTSL 2 BASIC3.13□□□□□ -1.91
LSM3P62310 RNU6-579P-201ENST00000516879 102 ntBASIC3.13□□□□□ -1.91
LSM3P62310 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.13□□□□□ -1.91
LSM3P62310 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.13□□□□□ -1.91
LSM3P62310 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.13□□□□□ -1.91
LSM3P62310 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.13□□□□□ -1.91
LSM3P62310 AC005191.1-201ENST00000603950 358 ntBASIC3.13□□□□□ -1.91
LSM3P62310 AL049634.3-201ENST00000604968 457 ntBASIC3.13□□□□□ -1.91
LSM3P62310 AC019193.2-201ENST00000610012 634 ntBASIC3.13□□□□□ -1.91
LSM3P62310 MIR7703-201ENST00000620784 77 ntBASIC3.13□□□□□ -1.91
LSM3P62310 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LSM3P62310 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
LSM3P62310 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LSM3P62310 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
LSM3P62310 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.12□□□□□ -1.91
LSM3P62310 BX005019.1-201ENST00000561881 1810 ntBASIC3.12□□□□□ -1.91
LSM3P62310 AC139713.2-214ENST00000642059 1811 ntBASIC3.12□□□□□ -1.91
LSM3P62310 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
LSM3P62310 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LSM3P62310 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LSM3P62310 RNA5SP509-201ENST00000364577 119 ntBASIC3.12□□□□□ -1.91
LSM3P62310 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LSM3P62310 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LSM3P62310 MIR1178-201ENST00000408396 91 ntBASIC3.12□□□□□ -1.91
LSM3P62310 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
LSM3P62310 RNA5SP239-201ENST00000410218 129 ntBASIC3.12□□□□□ -1.91
LSM3P62310 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.12□□□□□ -1.91
LSM3P62310 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.12□□□□□ -1.91
LSM3P62310 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.12□□□□□ -1.91
LSM3P62310 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.12□□□□□ -1.91
LSM3P62310 CYCSP53-201ENST00000455540 265 ntBASIC3.12□□□□□ -1.91
LSM3P62310 UBDP1-202ENST00000457888 382 ntBASIC3.12□□□□□ -1.91
LSM3P62310 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.12□□□□□ -1.91
LSM3P62310 S100A11P1-201ENST00000477525 312 ntBASIC3.12□□□□□ -1.91
LSM3P62310 TRBV8-1-201ENST00000481590 279 ntBASIC3.12□□□□□ -1.91
LSM3P62310 AC105137.1-201ENST00000484355 562 ntBASIC3.12□□□□□ -1.91
LSM3P62310 AC091167.1-201ENST00000492017 396 ntBASIC3.12□□□□□ -1.91
LSM3P62310 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.12□□□□□ -1.91
LSM3P62310 NDUFB4P9-201ENST00000511646 388 ntBASIC3.12□□□□□ -1.91
LSM3P62310 AC245166.1-201ENST00000521012 253 ntBASIC3.12□□□□□ -1.91
LSM3P62310 AP000926.4-201ENST00000527351 454 ntBASIC3.12□□□□□ -1.91
LSM3P62310 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
LSM3P62310 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.12□□□□□ -1.91
LSM3P62310 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC3.12□□□□□ -1.91
LSM3P62310 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
LSM3P62310 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.12□□□□□ -1.91
LSM3P62310 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms