Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 AL445264.1-201ENST00000621719 171 ntBASIC5.85□□□□□ -1.47
ERVFC1P60507 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC5.85□□□□□ -1.47
ERVFC1P60507 CYP4F35P-202ENST00000636121 390 ntBASIC5.85□□□□□ -1.47
ERVFC1P60507 MIR1321-201ENST00000637766 79 ntBASIC5.85□□□□□ -1.47
ERVFC1P60507 CRYM-AS1-204ENST00000637983 556 ntBASIC5.85□□□□□ -1.47
ERVFC1P60507 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
ERVFC1P60507 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ERVFC1P60507 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.85□□□□□ -1.47
ERVFC1P60507 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ERVFC1P60507 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ERVFC1P60507 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
ERVFC1P60507 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.85□□□□□ -1.47
ERVFC1P60507 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
ERVFC1P60507 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
ERVFC1P60507 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.85□□□□□ -1.47
ERVFC1P60507 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
ERVFC1P60507 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
ERVFC1P60507 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
ERVFC1P60507 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.85□□□□□ -1.47
ERVFC1P60507 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ERVFC1P60507 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ERVFC1P60507 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.84□□□□□ -1.47
ERVFC1P60507 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.84□□□□□ -1.47
ERVFC1P60507 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
ERVFC1P60507 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.84□□□□□ -1.47
ERVFC1P60507 RNU6-1339P-201ENST00000363574 91 ntBASIC5.84□□□□□ -1.47
ERVFC1P60507 Y_RNA.356-201ENST00000365475 113 ntBASIC5.84□□□□□ -1.47
ERVFC1P60507 SNORA70H-201ENST00000383910 135 ntBASIC5.84□□□□□ -1.47
ERVFC1P60507 SNORA70J-201ENST00000384182 135 ntBASIC5.84□□□□□ -1.47
ERVFC1P60507 MIR16-1-201ENST00000385271 89 ntBASIC5.84□□□□□ -1.47
ERVFC1P60507 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
ERVFC1P60507 RNU1-149P-201ENST00000390870 161 ntBASIC5.84□□□□□ -1.47
ERVFC1P60507 RNA5SP91-201ENST00000390902 119 ntBASIC5.84□□□□□ -1.47
ERVFC1P60507 AL034403.1-201ENST00000399414 885 ntBASIC5.84□□□□□ -1.47
ERVFC1P60507 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.84□□□□□ -1.47
ERVFC1P60507 AL121835.1-201ENST00000404250 354 ntBASIC5.84□□□□□ -1.47
ERVFC1P60507 OR4K12P-201ENST00000406538 961 ntBASIC5.84□□□□□ -1.47
ERVFC1P60507 AL356776.1-201ENST00000406574 447 ntBASIC5.84□□□□□ -1.47
ERVFC1P60507 AC068533.2-201ENST00000411872 306 ntBASIC5.84□□□□□ -1.47
ERVFC1P60507 MTCO1P20-201ENST00000425366 358 ntBASIC5.84□□□□□ -1.47
ERVFC1P60507 Z93242.1-201ENST00000427102 353 ntBASIC5.84□□□□□ -1.47
ERVFC1P60507 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.84□□□□□ -1.47
ERVFC1P60507 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.84□□□□□ -1.47
ERVFC1P60507 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.84□□□□□ -1.47
ERVFC1P60507 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.84□□□□□ -1.47
ERVFC1P60507 AL596266.1-201ENST00000448132 400 ntBASIC5.84□□□□□ -1.47
ERVFC1P60507 MEMO1P4-201ENST00000453590 386 ntBASIC5.84□□□□□ -1.47
ERVFC1P60507 RAD23BP3-201ENST00000454157 1152 ntBASIC5.84□□□□□ -1.47
ERVFC1P60507 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.84□□□□□ -1.47
ERVFC1P60507 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.84□□□□□ -1.47
ERVFC1P60507 AC011352.3-201ENST00000505162 593 ntBASIC5.84□□□□□ -1.47
ERVFC1P60507 HMGB1P29-201ENST00000505659 499 ntBASIC5.84□□□□□ -1.47
ERVFC1P60507 FGF7P4-201ENST00000509595 295 ntBASIC5.84□□□□□ -1.47
ERVFC1P60507 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.84□□□□□ -1.47
ERVFC1P60507 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.84□□□□□ -1.47
ERVFC1P60507 AP001922.4-201ENST00000526967 290 ntBASIC5.84□□□□□ -1.47
ERVFC1P60507 OR5AP1P-201ENST00000529730 940 ntBASIC5.84□□□□□ -1.47
ERVFC1P60507 AC025260.1-201ENST00000548858 430 ntBASIC5.84□□□□□ -1.47
ERVFC1P60507 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.84□□□□□ -1.47
ERVFC1P60507 AC104785.1-201ENST00000603220 588 ntBASIC5.84□□□□□ -1.47
ERVFC1P60507 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.84□□□□□ -1.47
ERVFC1P60507 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.84□□□□□ -1.47
ERVFC1P60507 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.84□□□□□ -1.47
ERVFC1P60507 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ERVFC1P60507 AC002550.2-201ENST00000621246 394 ntBASIC5.84□□□□□ -1.47
ERVFC1P60507 AC090574.1-201ENST00000623186 233 ntBASIC5.84□□□□□ -1.47
ERVFC1P60507 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.84□□□□□ -1.47
ERVFC1P60507 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ERVFC1P60507 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
ERVFC1P60507 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
ERVFC1P60507 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.84□□□□□ -1.47
ERVFC1P60507 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ERVFC1P60507 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ERVFC1P60507 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.84□□□□□ -1.47
ERVFC1P60507 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ERVFC1P60507 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ERVFC1P60507 MT-RNR2-201ENST00000387347 1559 ntBASIC5.84□□□□□ -1.48
ERVFC1P60507 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
ERVFC1P60507 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
ERVFC1P60507 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
ERVFC1P60507 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ERVFC1P60507 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
ERVFC1P60507 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
ERVFC1P60507 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
ERVFC1P60507 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.83□□□□□ -1.48
ERVFC1P60507 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ERVFC1P60507 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ERVFC1P60507 DCAF13P1-201ENST00000495256 1330 ntBASIC5.83□□□□□ -1.48
ERVFC1P60507 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
ERVFC1P60507 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.83□□□□□ -1.48
ERVFC1P60507 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
ERVFC1P60507 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ERVFC1P60507 RNU6-780P-201ENST00000391030 104 ntBASIC5.83□□□□□ -1.48
ERVFC1P60507 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.83□□□□□ -1.48
ERVFC1P60507 Y_RNA.598-201ENST00000410480 95 ntBASIC5.83□□□□□ -1.48
ERVFC1P60507 AL354751.2-201ENST00000415471 210 ntBASIC5.83□□□□□ -1.48
ERVFC1P60507 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC5.83□□□□□ -1.48
ERVFC1P60507 AC007161.1-204ENST00000423039 460 ntBASIC5.83□□□□□ -1.48
ERVFC1P60507 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.83□□□□□ -1.48
ERVFC1P60507 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms