Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.69□□□□□ -1.66
NR1H2P55055 AP000676.2-201ENST00000529711 301 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.69□□□□□ -1.66
NR1H2P55055 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.69□□□□□ -1.66
NR1H2P55055 MTND3P13-201ENST00000574391 343 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.69□□□□□ -1.66
NR1H2P55055 VN1R83P-201ENST00000595685 445 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 AL357094.1-201ENST00000603845 844 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 AC068313.1-201ENST00000604028 1008 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.69□□□□□ -1.66
NR1H2P55055 AC113194.1-201ENST00000606037 500 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
NR1H2P55055 AC009464.1-201ENST00000615731 469 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 AC099669.2-201ENST00000616549 437 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.69□□□□□ -1.66
NR1H2P55055 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NR1H2P55055 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
NR1H2P55055 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NR1H2P55055 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.69□□□□□ -1.66
NR1H2P55055 AC017104.4-201ENST00000636283 1592 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 OR14L1P-202ENST00000641545 3009 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NR1H2P55055 MAPK10-303ENST00000641324 3959 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NR1H2P55055 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NR1H2P55055 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.68□□□□□ -1.66
NR1H2P55055 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NR1H2P55055 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NR1H2P55055 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NR1H2P55055 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
NR1H2P55055 RNU1-108P-201ENST00000362556 161 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 RNU6-251P-201ENST00000363235 104 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 SUGT1P1-201ENST00000379514 476 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 SNORA16A-201ENST00000384342 137 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 SNORA66-201ENST00000384792 133 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 MIR649-201ENST00000384843 97 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 SNORD65.1-201ENST00000390889 71 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 AL161909.1-201ENST00000397390 712 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 HSPA8P15-201ENST00000401676 786 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 RPL31P45-201ENST00000419532 356 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.68□□□□□ -1.66
NR1H2P55055 OR4F13P-201ENST00000428478 931 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.68□□□□□ -1.66
NR1H2P55055 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.68□□□□□ -1.66
NR1H2P55055 Z77249.1-201ENST00000444622 1175 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 AC004980.3-201ENST00000447046 365 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 BX276092.4-201ENST00000452056 248 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.68□□□□□ -1.66
NR1H2P55055 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 AC091180.1-201ENST00000462104 372 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 AC058823.1-201ENST00000485315 474 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.68□□□□□ -1.66
NR1H2P55055 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 AC110775.1-201ENST00000513721 462 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.68□□□□□ -1.66
NR1H2P55055 RN7SKP66-201ENST00000516681 231 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 RN7SKP277-201ENST00000516895 283 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.68□□□□□ -1.66
NR1H2P55055 CDH12P4-201ENST00000517835 295 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 CDH12P3-201ENST00000517935 295 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 CDH12P1-201ENST00000518435 295 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.68□□□□□ -1.66
NR1H2P55055 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.68□□□□□ -1.66
NR1H2P55055 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.68□□□□□ -1.66
NR1H2P55055 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.68□□□□□ -1.66
NR1H2P55055 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.68□□□□□ -1.66
NR1H2P55055 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.68□□□□□ -1.66
NR1H2P55055 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NR1H2P55055 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.68□□□□□ -1.66
NR1H2P55055 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.68□□□□□ -1.66
NR1H2P55055 MTND3P12-201ENST00000559068 328 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 NDUFB4P11-201ENST00000560510 395 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.68□□□□□ -1.66
NR1H2P55055 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.68□□□□□ -1.66
NR1H2P55055 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.68□□□□□ -1.66
NR1H2P55055 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.68□□□□□ -1.66
NR1H2P55055 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.68□□□□□ -1.66
NR1H2P55055 AC090527.3-201ENST00000619041 548 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.68□□□□□ -1.66
NR1H2P55055 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NR1H2P55055 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NR1H2P55055 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
NR1H2P55055 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
NR1H2P55055 ECM1P2-201ENST00000503354 1577 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NR1H2P55055 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
NR1H2P55055 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NR1H2P55055 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NR1H2P55055 DDX18P5-201ENST00000534547 1306 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NR1H2P55055 AL672167.1-203ENST00000641299 2975 ntBASIC4.68□□□□□ -1.66
NR1H2P55055 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.68□□□□□ -1.66
NR1H2P55055 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.68□□□□□ -1.66
NR1H2P55055 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
NR1H2P55055 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NR1H2P55055 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NR1H2P55055 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NR1H2P55055 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NR1H2P55055 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NR1H2P55055 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms