Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CLCNKAP51800 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLCNKAP51800 MTCO1P56-201ENST00000401674 224 ntBASIC4.5□□□□□ -1.69
CLCNKAP51800 MIR1303-201ENST00000408625 86 ntBASIC4.5□□□□□ -1.69
CLCNKAP51800 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLCNKAP51800 ELOCP19-201ENST00000411919 318 ntBASIC4.5□□□□□ -1.69
CLCNKAP51800 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.5□□□□□ -1.69
CLCNKAP51800 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.5□□□□□ -1.69
CLCNKAP51800 CENPIP1-201ENST00000425713 902 ntBASIC4.5□□□□□ -1.69
CLCNKAP51800 HIGD1AP12-201ENST00000427832 281 ntBASIC4.5□□□□□ -1.69
CLCNKAP51800 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.5□□□□□ -1.69
CLCNKAP51800 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.5□□□□□ -1.69
CLCNKAP51800 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.5□□□□□ -1.69
CLCNKAP51800 DNAJC19P8-201ENST00000452887 259 ntBASIC4.5□□□□□ -1.69
CLCNKAP51800 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.5□□□□□ -1.69
CLCNKAP51800 MTCO2P6-201ENST00000463134 685 ntBASIC4.5□□□□□ -1.69
CLCNKAP51800 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.5□□□□□ -1.69
CLCNKAP51800 CEACAMP10-202ENST00000495431 496 ntBASIC4.5□□□□□ -1.69
CLCNKAP51800 AC104108.1-201ENST00000509930 412 ntBASIC4.5□□□□□ -1.69
CLCNKAP51800 OR51K1P-201ENST00000510214 950 ntBASIC4.5□□□□□ -1.69
CLCNKAP51800 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.5□□□□□ -1.69
CLCNKAP51800 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.5□□□□□ -1.69
CLCNKAP51800 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.5□□□□□ -1.69
CLCNKAP51800 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.5□□□□□ -1.69
CLCNKAP51800 AC009712.1-201ENST00000564938 316 ntBASIC4.5□□□□□ -1.69
CLCNKAP51800 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLCNKAP51800 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.5□□□□□ -1.69
CLCNKAP51800 AC209154.1-201ENST00000582156 337 ntBASIC4.5□□□□□ -1.69
CLCNKAP51800 MTND3P19-201ENST00000603825 345 ntBASIC4.5□□□□□ -1.69
CLCNKAP51800 AL035411.2-201ENST00000604022 421 ntBASIC4.5□□□□□ -1.69
CLCNKAP51800 ELOCP35-201ENST00000604289 336 ntBASIC4.5□□□□□ -1.69
CLCNKAP51800 AC009948.4-201ENST00000604692 675 ntBASIC4.5□□□□□ -1.69
CLCNKAP51800 AC009237.15-201ENST00000610252 501 ntBASIC4.5□□□□□ -1.69
CLCNKAP51800 AC013470.4-201ENST00000619978 986 ntBASIC4.5□□□□□ -1.69
CLCNKAP51800 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLCNKAP51800 AC009951.1-201ENST00000623674 2614 ntBASIC4.5□□□□□ -1.69
CLCNKAP51800 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CLCNKAP51800 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLCNKAP51800 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.5□□□□□ -1.69
CLCNKAP51800 AC100871.1-201ENST00000507871 1456 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.49□□□□□ -1.69
CLCNKAP51800 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.49□□□□□ -1.69
CLCNKAP51800 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLCNKAP51800 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLCNKAP51800 OR56B2P-201ENST00000317102 954 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.49□□□□□ -1.69
CLCNKAP51800 RNU6-636P-201ENST00000384598 107 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLCNKAP51800 RPS24P12-201ENST00000402084 394 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 AC092745.2-202ENST00000411880 369 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.49□□□□□ -1.69
CLCNKAP51800 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.49□□□□□ -1.69
CLCNKAP51800 AC004690.1-201ENST00000418216 328 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.49□□□□□ -1.69
CLCNKAP51800 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.49□□□□□ -1.69
CLCNKAP51800 EEF1A1P39-201ENST00000440791 250 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.49□□□□□ -1.69
CLCNKAP51800 MTCYBP42-201ENST00000444653 1130 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 TDGF1P1-201ENST00000445734 527 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 AL929288.2-201ENST00000446368 407 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 AC004022.1-201ENST00000447766 1066 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 AL589880.1-201ENST00000448271 287 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 CYCSP34-201ENST00000458172 304 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 AC005410.1-202ENST00000460347 485 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.49□□□□□ -1.69
CLCNKAP51800 RN7SL481P-201ENST00000477764 299 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.49□□□□□ -1.69
CLCNKAP51800 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.49□□□□□ -1.69
CLCNKAP51800 HMGB1P23-201ENST00000518743 568 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.49□□□□□ -1.69
CLCNKAP51800 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.49□□□□□ -1.69
CLCNKAP51800 DEFB130C-202ENST00000530001 230 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLCNKAP51800 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.49□□□□□ -1.69
CLCNKAP51800 AC023538.1-201ENST00000534576 736 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.49□□□□□ -1.69
CLCNKAP51800 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.49□□□□□ -1.69
CLCNKAP51800 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.49□□□□□ -1.69
CLCNKAP51800 POLR2KP1-201ENST00000553226 168 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 OR4U1P-201ENST00000554958 912 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.49□□□□□ -1.69
CLCNKAP51800 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.49□□□□□ -1.69
CLCNKAP51800 AC023813.2-201ENST00000564321 469 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.49□□□□□ -1.69
CLCNKAP51800 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.49□□□□□ -1.69
CLCNKAP51800 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.49□□□□□ -1.69
CLCNKAP51800 RPL12P25-202ENST00000598100 674 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 RNF138P2-201ENST00000603490 592 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 AL392112.1-201ENST00000605115 829 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 AC004908.3-201ENST00000610248 625 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 AP005019.3-201ENST00000620418 560 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 AC120349.3-201ENST00000624377 529 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 AC019226.2-201ENST00000625973 424 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.49□□□□□ -1.69
CLCNKAP51800 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.49□□□□□ -1.69
CLCNKAP51800 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.49□□□□□ -1.69
CLCNKAP51800 SALL4P2-201ENST00000423288 2910 ntBASIC4.49□□□□□ -1.69
CLCNKAP51800 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CLCNKAP51800 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms