Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
MMP13P45452 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
MMP13P45452 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
MMP13P45452 SOCS5P3-201ENST00000425115 1576 ntBASIC4.87□□□□□ -1.63
MMP13P45452 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.87□□□□□ -1.63
MMP13P45452 AC091046.3-201ENST00000631455 1574 ntBASIC4.87□□□□□ -1.63
MMP13P45452 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
MMP13P45452 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
MMP13P45452 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
MMP13P45452 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.86□□□□□ -1.63
MMP13P45452 CASC19-204ENST00000641001 2055 ntBASIC4.86□□□□□ -1.63
MMP13P45452 RNU1-108P-201ENST00000362556 161 ntBASIC4.86□□□□□ -1.63
MMP13P45452 Y_RNA.77-201ENST00000362962 107 ntBASIC4.86□□□□□ -1.63
MMP13P45452 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.86□□□□□ -1.63
MMP13P45452 SNORD65C-201ENST00000390962 71 ntBASIC4.86□□□□□ -1.63
MMP13P45452 HMGB1P10-201ENST00000395823 563 ntBASIC4.86□□□□□ -1.63
MMP13P45452 RPS3AP26-201ENST00000398259 784 ntBASIC4.86□□□□□ -1.63
MMP13P45452 RNA5SP296-201ENST00000410523 111 ntBASIC4.86□□□□□ -1.63
MMP13P45452 AF274854.1-201ENST00000413236 615 ntBASIC4.86□□□□□ -1.63
MMP13P45452 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.86□□□□□ -1.63
MMP13P45452 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
MMP13P45452 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.86□□□□□ -1.63
MMP13P45452 RPL7P57-201ENST00000423238 740 ntBASIC4.86□□□□□ -1.63
MMP13P45452 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.86□□□□□ -1.63
MMP13P45452 AL645608.4-201ENST00000423619 154 ntBASIC4.86□□□□□ -1.63
MMP13P45452 GTF2IP2-201ENST00000424290 697 ntBASIC4.86□□□□□ -1.63
MMP13P45452 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.86□□□□□ -1.63
MMP13P45452 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.86□□□□□ -1.63
MMP13P45452 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.86□□□□□ -1.63
MMP13P45452 PRELID3BP7-201ENST00000503606 469 ntBASIC4.86□□□□□ -1.63
MMP13P45452 HPRT1P2-201ENST00000505250 544 ntBASIC4.86□□□□□ -1.63
MMP13P45452 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.86□□□□□ -1.63
MMP13P45452 AC091868.1-201ENST00000508746 304 ntBASIC4.86□□□□□ -1.63
MMP13P45452 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.86□□□□□ -1.63
MMP13P45452 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.86□□□□□ -1.63
MMP13P45452 RNU6-232P-201ENST00000517144 64 ntBASIC4.86□□□□□ -1.63
MMP13P45452 NRON-201ENST00000517270 370 ntBASIC4.86□□□□□ -1.63
MMP13P45452 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.86□□□□□ -1.63
MMP13P45452 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.86□□□□□ -1.63
MMP13P45452 AP001880.2-201ENST00000538233 448 ntBASIC4.86□□□□□ -1.63
MMP13P45452 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.86□□□□□ -1.63
MMP13P45452 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.86□□□□□ -1.63
MMP13P45452 SULT1C2P2-201ENST00000562517 294 ntBASIC4.86□□□□□ -1.63
MMP13P45452 AC010546.1-201ENST00000569391 485 ntBASIC4.86□□□□□ -1.63
MMP13P45452 AC015912.2-201ENST00000571053 181 ntBASIC4.86□□□□□ -1.63
MMP13P45452 VN1R90P-201ENST00000595717 726 ntBASIC4.86□□□□□ -1.63
MMP13P45452 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.86□□□□□ -1.63
MMP13P45452 AL512782.1-201ENST00000603093 364 ntBASIC4.86□□□□□ -1.63
MMP13P45452 AP002906.1-201ENST00000603405 233 ntBASIC4.86□□□□□ -1.63
MMP13P45452 AC010738.1-201ENST00000604970 987 ntBASIC4.86□□□□□ -1.63
MMP13P45452 AC023813.4-201ENST00000607580 580 ntBASIC4.86□□□□□ -1.63
MMP13P45452 AL355073.2-201ENST00000612106 557 ntBASIC4.86□□□□□ -1.63
MMP13P45452 AL121890.3-201ENST00000618494 516 ntBASIC4.86□□□□□ -1.63
MMP13P45452 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.86□□□□□ -1.63
MMP13P45452 AC055839.1-201ENST00000634467 498 ntBASIC4.86□□□□□ -1.63
MMP13P45452 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
MMP13P45452 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
MMP13P45452 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
MMP13P45452 AC005832.2-201ENST00000538921 1430 ntBASIC4.86□□□□□ -1.63
MMP13P45452 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.86□□□□□ -1.63
MMP13P45452 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.86□□□□□ -1.63
MMP13P45452 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
MMP13P45452 OR51H2P-202ENST00000641424 3046 ntBASIC4.86□□□□□ -1.63
MMP13P45452 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
MMP13P45452 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
MMP13P45452 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.85□□□□□ -1.63
MMP13P45452 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
MMP13P45452 MAPK10-303ENST00000641324 3959 ntBASIC4.85□□□□□ -1.63
MMP13P45452 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
MMP13P45452 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
MMP13P45452 MAPK10-320ENST00000641462 6696 ntBASIC4.85□□□□□ -1.63
MMP13P45452 LINC01109-201ENST00000603837 3081 ntBASIC4.85□□□□□ -1.63
MMP13P45452 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
MMP13P45452 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
MMP13P45452 OR56B2P-201ENST00000317102 954 ntBASIC4.85□□□□□ -1.63
MMP13P45452 ANKRD36P1-201ENST00000344424 659 ntBASIC4.85□□□□□ -1.63
MMP13P45452 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.85□□□□□ -1.63
MMP13P45452 RNU1-82P-201ENST00000390851 165 ntBASIC4.85□□□□□ -1.63
MMP13P45452 RPL7P53-201ENST00000421245 739 ntBASIC4.85□□□□□ -1.63
MMP13P45452 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.85□□□□□ -1.63
MMP13P45452 AC004074.1-201ENST00000421810 1063 ntBASIC4.85□□□□□ -1.63
MMP13P45452 AC006065.1-201ENST00000422539 802 ntBASIC4.85□□□□□ -1.63
MMP13P45452 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
MMP13P45452 NRBF2P3-201ENST00000432731 865 ntBASIC4.85□□□□□ -1.63
MMP13P45452 AC008072.1-201ENST00000434254 824 ntBASIC4.85□□□□□ -1.63
MMP13P45452 LYPLA1P1-201ENST00000434514 622 ntBASIC4.85□□□□□ -1.63
MMP13P45452 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.85□□□□□ -1.63
MMP13P45452 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.85□□□□□ -1.63
MMP13P45452 AC097262.1-201ENST00000452559 548 ntBASIC4.85□□□□□ -1.63
MMP13P45452 AL645937.3-201ENST00000453647 936 ntBASIC4.85□□□□□ -1.63
MMP13P45452 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.85□□□□□ -1.63
MMP13P45452 RPL23AP65-201ENST00000475608 468 ntBASIC4.85□□□□□ -1.63
MMP13P45452 SCARNA22-201ENST00000503991 125 ntBASIC4.85□□□□□ -1.63
MMP13P45452 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.85□□□□□ -1.63
MMP13P45452 MTND3P5-201ENST00000512798 333 ntBASIC4.85□□□□□ -1.63
MMP13P45452 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.85□□□□□ -1.63
MMP13P45452 DEFB130C-202ENST00000530001 230 ntBASIC4.85□□□□□ -1.63
MMP13P45452 OR5D15P-201ENST00000531671 942 ntBASIC4.85□□□□□ -1.63
MMP13P45452 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
MMP13P45452 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms